| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0889 |
|---|
| Symbol | |
|---|
| ID | 3625934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1071814 |
|---|
| End bp | 1072677 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637699776 |
|---|
| Product | HtpX-2 peptidase |
|---|
| Protein accession | YP_304443 |
|---|
| Protein GI | 73668428 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA TGCTTAAAAC TACAATTTTG CTTGCCACCC TTACAGGCCT CCTGGTTCTG
ATAGGAGACT ACTTTGGAGG TACGGGCGGA ATGATTATTG CGTTCCTGTT TGCAATAATT
ATGAATTTTG GAAGTTACTG GTACAGCGAC AAAATAGTAC TCAAAATGTA CAGGGCAAAG
GAAGTCTCAC CTGCGGAAGC TCCGAACCTG CACAGGATCG TCGATGGACT GGCTATGAAA
GCAGGAATCC CAAAGCCCAA AGTGTATATC GTAGAATCCG GAATGCCAAA TGCCTTTGCA
ACCGGAAGAA ACCCAGAGCA TGCGGCTGTG GCTGCTACAA CTGGAATTCT TGAGTTACTA
TCTTATGAAG AAATGGAAGG CGTGCTGGCA CACGAGCTTG CACATGTGAA GAACAGGGAT
ACCCTGATAA GTGCTATAGC TGCAACTCTT GCAGGTGTTA TCACAATGCT TGCCCACTGG
GCACAATGGG CTGCAATTTT CGGCGGCTTC GGCGGCAACA GAGATGATGA CAACGGAGGA
ATCATAGGCC TCATCGCGAT GGCAATTCTA GCGCCTCTCG CTGCAACTTT GATCCAGCTT
GCGATCTCAA GATCAAGAGA ATATGCAGCT GATGCAGAAG GAGCCAGCAT ATCCAGAAAA
CCCTGGGCTC TTGCCAATGC CCTTGAAAAA CTCGAATACG GGAACTCTCA CTATAAGCCG
AGAGTCTCAG ATGTCCAGGC AAAAGAAAGC AGCGCCCATA TGTTTATTGT CAATCCATTA
AAAGGAGGAG CAATTCAGTC TCTTTTCAGT ACTCACCCTG TAACCGAAGA AAGGGTAAGG
CGCCTTAGGG CAATGAGGTT CTGA
|
|---|
| Protein sequence | MKNMLKTTIL LATLTGLLVL IGDYFGGTGG MIIAFLFAII MNFGSYWYSD KIVLKMYRAK
EVSPAEAPNL HRIVDGLAMK AGIPKPKVYI VESGMPNAFA TGRNPEHAAV AATTGILELL
SYEEMEGVLA HELAHVKNRD TLISAIAATL AGVITMLAHW AQWAAIFGGF GGNRDDDNGG
IIGLIAMAIL APLAATLIQL AISRSREYAA DAEGASISRK PWALANALEK LEYGNSHYKP
RVSDVQAKES SAHMFIVNPL KGGAIQSLFS THPVTEERVR RLRAMRF
|
|---|
| |