Gene Mbar_A0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0830 
Symbol 
ID3625568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1005357 
End bp1005920 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content49% 
IMG OID637699721 
Producthypothetical protein 
Protein accessionYP_304387 
Protein GI73668372 
COG category[R] General function prediction only 
COG ID[COG1342] Predicted DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.125088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTT TAGAGTCAGA GCCTGAATGG ATGCAAAACT ATATATGTTT TGCATTATTA 
TGCATAACTA TGCGCCCTAG AAAACGAAGG ATGGTGGATT TCGAACATTC GGCAAGGCAG
TTTAGGCCTT TATGTCCAGA AAACGAAATT CCCGAAGAGA TCTTGCTGAC AATAGACGAA
CTCGAGGCCA TGAGACTCAG CTTTCTAGAA AAGCTTTCCC AGAGTGAAGC TGCAGTCCAT
ATGGAGGTTC ATCAGTCCAC TTTTCAGAGG GCGCTGAAAA AAGCACTTGA AAAAGTAACT
GAAGCGCTTG TCTATGGGAA AGCGATAAGA ATTGAAGGAG GAGATTACAG GATGCCAAGA
GGAGACGGTA CAGGTCCTGC AGGTCAGGGC CAGGTTGGCG GTGGAAGACG CCGCGGACAG
GGCAGAGGCC AGGGAGGACG GTTCGGCGGA AGTGAAGGAA CCTGCGTATG TCCTGCCTGT
GGGTATGAGA CTCCCCATAT TCCGGGGGTT GCCTGCAACC AGGTGAAGTG CGAGAAATGC
GGAAGTCCTA TGGTCAGAAA GTGA
 
Protein sequence
MAILESEPEW MQNYICFALL CITMRPRKRR MVDFEHSARQ FRPLCPENEI PEEILLTIDE 
LEAMRLSFLE KLSQSEAAVH MEVHQSTFQR ALKKALEKVT EALVYGKAIR IEGGDYRMPR
GDGTGPAGQG QVGGGRRRGQ GRGQGGRFGG SEGTCVCPAC GYETPHIPGV ACNQVKCEKC
GSPMVRK