Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0790 |
Symbol | |
ID | 3627909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 951850 |
End bp | 952965 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699681 |
Product | putative ABC transporter permease protein |
Protein accession | YP_304347 |
Protein GI | 73668332 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.119405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACC TCATCATCCG AAATATTCTG AACAGAAAGG TCAGGAGTGC ACTGACAGTC TGTGGGATTG CCCTTGGAAT CTTTGCAGTT ATAGTTATGG GTGCAATGTC CGAAAATTTC CACCAGACAT TTGAGCGTTC CATGAGTGTG ACCAGCGACA AAATTAGGGT CTTTTCCGAA AGCGGAGTCT TTGGAGGAGG ACTCACGGAC GATAAGGTAA GCGACGTGCT TCGGGTGGCA GGGGTAAAAG ATGCATATGG GCTTTTAATG ACTACTTTTG ATGAGGACAA AATGGGAATG ACCGGGAAGC AAATCCTGGG CGTCCCCCCG GAAAAATCCA GCGTTGCCCT TTACCCTGTG GAGCTGAAAG CAGGCCGTTT CCTCAATCCT GGGGATTCTT ATAATGTTGT TGTCGGAAGC AACATACAGA GGGAATATAA ACTACAGATC GGGAGTAAGT TTGAGATACA TGACAAGTAT TTCACTGTTG TAGGAATTCT GGATTATACT GGCTCGATTT TTGACAACGC GGTGATTATA CCTCTTGAAA CCGCACAGGA TCTCTACGAT GTTGGCAATT CGATTTCCTA TATCTTTGCA GTGCCTGATG AACGGATCGA TGCCGAGATG CTCTCCAAAC GCATAGAATT AAGCGTTAAA GGTACAAGCA CCCTTTCTCC CAACGAGCTT GAAATGCAGG CAAGGCAGTC CTTCATGATT TTCAGCGTAA TCACTATCAG CTCAGGACTC CTTGCAGCAA TCATAGGCGG GCTTTGCGTA ATGAATACCA TGCTCATGTC CGTTGCCGAG AGAACAAGAG AATTTGGGAT TTTAAAAGCC ATTGGGGCCG AAACAAGGGA TATTTTGCTC CTCACGCTTG GGGAAGCTTC TGTTATGGGT CTCTTCGGTG GGGTCCTTGG AATTCTTGTG GGTACCGGAG CTGTTTATAT TATGAATGCC TGGCTTGCAA ATACAAGGAT AGTGCTTTTC CTGATAACGC CCAGGCTCCT CATAATTGCC ATGCTCTTTG CTTTACTTAT AGGGGCTCTT TCAGGACTTT ATCCTGCGTA CAGGGCTTCG AAAATGAGTC CTATGGAGGC TCTGAAGCAT GCCTGA
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Protein sequence | MFDLIIRNIL NRKVRSALTV CGIALGIFAV IVMGAMSENF HQTFERSMSV TSDKIRVFSE SGVFGGGLTD DKVSDVLRVA GVKDAYGLLM TTFDEDKMGM TGKQILGVPP EKSSVALYPV ELKAGRFLNP GDSYNVVVGS NIQREYKLQI GSKFEIHDKY FTVVGILDYT GSIFDNAVII PLETAQDLYD VGNSISYIFA VPDERIDAEM LSKRIELSVK GTSTLSPNEL EMQARQSFMI FSVITISSGL LAAIIGGLCV MNTMLMSVAE RTREFGILKA IGAETRDILL LTLGEASVMG LFGGVLGILV GTGAVYIMNA WLANTRIVLF LITPRLLIIA MLFALLIGAL SGLYPAYRAS KMSPMEALKH A
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