| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0740 |
|---|
| Symbol | |
|---|
| ID | 3624441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 894830 |
|---|
| End bp | 895606 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637699632 |
|---|
| Product | methanol corrinoid protein |
|---|
| Protein accession | YP_304298 |
|---|
| Protein GI | 73668283 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5012] Predicted cobalamin binding protein |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.970556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGACT TTACAGAGGC AAGTCTGAAA AAGGTTTTAA CCAGATACAA CGTGGCTCTG
GAAAAGGCAT TGACGCCTGA AGAAGCCGCA GAAGAACTCT ATCCTAAAGA CGAACTTATC
TACCCGATCG CAAAGGCCAT CTTCGAAGGA GAAGAAGATG ACGTTGTCGA GGGTCTCCAG
GCCGCAATCG AAGCTGGTAA GGACCCAATT GATCTTATTG ATGACGCTCT CATGGTCGGT
ATGGGCGTTG TCATAAGACT TTATGACGAA GGTGTAATTT TCCTCCCTAA CGTCATGATG
TCTGCTGATG CCATGCTTGA AGGTATCGAA TATTGTAAGG AAAACTCTGG TGCTACTCCT
AAAACCAAAG GAACCGTTGT CTGCCACGTC GCAGAAGGTG ACGTTCACGA CATTGGAAAG
AACATCGTTA CCGCTCTTCT CAGGGCAAAT GGCTACAATG TAGTTGACCT TGGAAGGGAC
GTACCTGCAG AAGAAGTTCT CGCCGCAGTT CAAAAAGAGA AGCCAATTAT GCTCACAGGT
ACTGCCCTCA TGACAACTAC CATGTATGCA TTCAAGGAAG TTAATGACAT GCTCCTTGAA
AATGGAATCA AGATTCCATT CGCATGCGGT GGCGGCGCAG TTAATCAGGA CTTCGTATCC
CAGTTTGCAC TTGGTGTATA TGGAGAAGAA GCCGCTGACG CCCCCAAGAT TGCTGATGCA
ATCATTGCAG GTACTACAGA TGTCACAGAA CTAAGAGAGA AATTCCACAA GCACTGA
|
|---|
| Protein sequence | MLDFTEASLK KVLTRYNVAL EKALTPEEAA EELYPKDELI YPIAKAIFEG EEDDVVEGLQ
AAIEAGKDPI DLIDDALMVG MGVVIRLYDE GVIFLPNVMM SADAMLEGIE YCKENSGATP
KTKGTVVCHV AEGDVHDIGK NIVTALLRAN GYNVVDLGRD VPAEEVLAAV QKEKPIMLTG
TALMTTTMYA FKEVNDMLLE NGIKIPFACG GGAVNQDFVS QFALGVYGEE AADAPKIADA
IIAGTTDVTE LREKFHKH
|
|---|
| |