| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0699 |
|---|
| Symbol | |
|---|
| ID | 3625766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 838204 |
|---|
| End bp | 838893 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637699591 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304257 |
|---|
| Protein GI | 73668242 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5549] Predicted Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.759494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGAG TTAGATTCTC TTTTATGCTG TTACTGATGG TACTTATTTT ACCCACTGTC
TCAGCTGTAT CTGAAGCGAA TCCGGAAAAA ATTCTGGATT ATCCATGGGA CCACTCCCCT
ATTACTGTAT ATATTGATGA CAGCAATGTT CCCGAACACT ACAGCCCGAG CTATTACGCG
CAAATAGAAA AGGCTATGGA ATACTGGGAG GAGGGAGGAA ACGGAAACCT TGAGTTTACT
CCTGTTTTCA AACTTGTGGA TTCTAAAGAA GCTGATATCA GGATAAAATG GGTCGAGAAT
CTGGAGAACG TTGAAGGTGC TCCTCAGGGC GTTGCTGGCT ATGCAAGCCC TAGAGTATCT
GATGGTCGAT TTGTAAGGGT CGACATAGTG CTTGAGGTAG GAAATTATCA AGGAAGAGCC
TGGTACCAGT ATGGGGATGC AACAATGCTT TCTATTGCAA AGCATGAATT CGGACATGCA
CTGGGCCTGG GGCATAGTAG CAACAGAAAA GATATCATGT ATCCTGAGTA CGAGCAAAGA
GAAGATATAA ACCCCCTCCT CCTGAGCAAG TACGGGCCTA TACTGCAGAT GGCAGCTCTT
GCGGCTCTTG TAGTTCTCCT GTCCCTCGGG GTAAGCTGGC TGCGCAGCAG GAAAAAAAGG
AAAAAACTTG AGAATAAATA TTTTAAGTAA
|
|---|
| Protein sequence | MYRVRFSFML LLMVLILPTV SAVSEANPEK ILDYPWDHSP ITVYIDDSNV PEHYSPSYYA
QIEKAMEYWE EGGNGNLEFT PVFKLVDSKE ADIRIKWVEN LENVEGAPQG VAGYASPRVS
DGRFVRVDIV LEVGNYQGRA WYQYGDATML SIAKHEFGHA LGLGHSSNRK DIMYPEYEQR
EDINPLLLSK YGPILQMAAL AALVVLLSLG VSWLRSRKKR KKLENKYFK
|
|---|
| |