Gene Mbar_A0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0679 
Symbol 
ID3625632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp811671 
End bp813008 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content41% 
IMG OID637699572 
Productsensory transduction histidine kinase 
Protein accessionYP_304238 
Protein GI73668223 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.502245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGAAAA ATATTGCTGA AGACTCCGGA CCTTCTTTAA AAGTTCCGCA GAGTCACCAG 
ATCTCTGCCG TGTATGAGGA CACCAAAGGA TTGATAGAAC TACTTGTTAC CTATTTTAAG
GAAGGACTTG AAGGGGGAGA ATATTGCTTA TGGGTTTCCC CGGATAAACT GGCCGCTGAA
GAGGCAAAAA ATGAACTTAT GAAGGTAGGA GTGGACGTCG AACCTTATCT CACTTCCTCT
CAGTTGGAAT TTCTGCCGGC TAATCCGCTC CCGGAAGATC TTACTCTTCT TGCGTCAACA
GTAACAGAAC TCGCAGAAAA GGGATATAGA AAAACCCTTT CGGGAGGATT TTCAGGATTT
AGAACAAATT TTGAGATTAA AAACGCCGGA AATTCTCTTA AACCCTGCCT TGAGACGTGT
GGTAAGGCAA TCGAAATAAT GGCTTTGGAA AAGAATAAAA GCATCACATT TCTCTATACC
ATTCCTCTCG AAGAACTTTC AGGTAGAGTT CTGCTCGAAT TAATGGAAGA AAGCAACGTT
TTTACCAAAA GAAAAGGGAA ATTGGAGAGT TTGAGAAGCC TGGAAGAAAA AATAGAGCTG
AAAAATGAAT TTCTCAAAGC AAAAAAAGAT ATAGACGCCT CAAACTGGGC TAAAAACGGG
CTGATAGTTA ACATGAACCA TGAACTTCGG ACTCCCCTTA ACTCGGTAAT AGGTTTCTCC
GATTTGCTGC TGGAAGGGGC TTTTGGGTCC CTGAACACGA GGCAATCAAA ATATGTAAGT
AATATTCTCA TAAGCGGAAA GAACCTTCTG GAAATTATCA GTAATCTACT TGATATATCA
AGGCTCGAAG CCGGAGAAAA GAACCTTAAC TATGAAGATG TAGATATTGC TAGCCTTTTA
GGAGAGGTAA GAATGAGTCT TCTCTCATTT GCCTCAAGTA AGAAAGTCAG TATAGAAATA
AAGGTCGATG CTTCTCTTGA GAACATCCGG GCTGACAGGA CAAAGCTGAG ACAGATTCTG
TACAGTCTAA TGAATAACGC TATAAAACTC ACTCCTGAAA AGAAAAAGGT TACTGTAAGT
GCCCTCAAAA AAGAAGGAAT GCTCGAGATT AAAGTGTCGG ATAGCGGAAT AGGGTTGTCA
AAAGAAGATC ATGAAAGGAT GCTTATGCCT TTCATTCAGG CAGATCTTTC CACAACCAGT
GGGTACGGTG GAACTGGGCT TGGGCTTTAT ATTGCTAAAA ACTTCATAGA TATTCACGGA
GGAAAAATCT GGGTGGAATC AAAAGGAGGA AAAGGCAGCA CATTTATCTT TACTCTTCCA
CTAAATGGAA GGAATTAA
 
Protein sequence
MRKNIAEDSG PSLKVPQSHQ ISAVYEDTKG LIELLVTYFK EGLEGGEYCL WVSPDKLAAE 
EAKNELMKVG VDVEPYLTSS QLEFLPANPL PEDLTLLAST VTELAEKGYR KTLSGGFSGF
RTNFEIKNAG NSLKPCLETC GKAIEIMALE KNKSITFLYT IPLEELSGRV LLELMEESNV
FTKRKGKLES LRSLEEKIEL KNEFLKAKKD IDASNWAKNG LIVNMNHELR TPLNSVIGFS
DLLLEGAFGS LNTRQSKYVS NILISGKNLL EIISNLLDIS RLEAGEKNLN YEDVDIASLL
GEVRMSLLSF ASSKKVSIEI KVDASLENIR ADRTKLRQIL YSLMNNAIKL TPEKKKVTVS
ALKKEGMLEI KVSDSGIGLS KEDHERMLMP FIQADLSTTS GYGGTGLGLY IAKNFIDIHG
GKIWVESKGG KGSTFIFTLP LNGRN