Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0601 |
Symbol | |
ID | 3627661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 723197 |
End bp | 724240 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637699494 |
Product | putative ABC-2 type transport system permease protein |
Protein accession | YP_304161 |
Protein GI | 73668146 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTTA ATGTTGTACT GGCTATCTTT AGAAAGGACT TAATATCATC GGTAAAAAGC AAAAATTTAT TGATAATACT ACTCACTCCG ATCTTTTTGT CAGTTCTCTT TAACTCTACG GTTTCATTGA CTGATAATAC CATAGTACCC ATTGCAGTTT ATGATGAAGG TTCCAGTGCA GATTTTATTG AATATCTAAG TTCGAGAGAT AACTATGACG TAATTATTGC AGACTCGACT GGTAAATCCG AAGAGTTACT TTATAATCAA AAAGTTGCAG CCGTTATGCT TGTGCCGGAA GGCTTCAGTG CCGACATAAA AAATGGACTA GACCCGTCCC TGAATATCAT TGTCAACCCT TATGAGGCAA AATCAGTTGC ATTTTTGCAA ACTTATAAAG ATATCATCAT GGACTTTGCA GGACAGAAAT ATCCAGTGAA TGTTATCTTA AATACGCTCC CTGAAGACTT ACAGTCCAGA TTTAACATTC CTATATGGAT TATGTTTACT GTAGTATTTG TTGGAATGAT GGTTTTACCA AATACGCTGA CTACAGAGAA AGAGAAAAAA ACCCTTGATG CAATACTTGT GTCACCAGCT TCGGAAAAAG ATGTGATTTA TGGCAAATCG TTTTTCGGAC TATTCCTGAC AATACTGATA TCTCTGGTTA TAATTATTAT AAATAAGGGT TTCGTCGGAA ACTTCCTATC GACCGCTGTT TTTATAATTC TCGGCTCTGC AGTATTCACA GGCCTTGGGC TTCTAATTGC CAGTTACGCT GATAACTACT CTTCAGCATC TCTGCTTTCC ACAATTTTCA TGGCACCTCT GATTTTACTT GCTCTGCTAG CCGATTTATC TCAAGAGATT GAGTATATCG CTCATCTTGT ACCAAGCACC TACGTGTTTT ACGGCATAAA AAGTGCTATG TTGAATAACT CCGGAATCTC TGACCTTTAT CCTGAAGTTG GAATCCTTCT TATATTTAAT ATTCTTGTAT ATATGCTGAC ATTTCGCGTT CTCAAGAAGA AGAGATATAT ATGA
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Protein sequence | MNLNVVLAIF RKDLISSVKS KNLLIILLTP IFLSVLFNST VSLTDNTIVP IAVYDEGSSA DFIEYLSSRD NYDVIIADST GKSEELLYNQ KVAAVMLVPE GFSADIKNGL DPSLNIIVNP YEAKSVAFLQ TYKDIIMDFA GQKYPVNVIL NTLPEDLQSR FNIPIWIMFT VVFVGMMVLP NTLTTEKEKK TLDAILVSPA SEKDVIYGKS FFGLFLTILI SLVIIIINKG FVGNFLSTAV FIILGSAVFT GLGLLIASYA DNYSSASLLS TIFMAPLILL ALLADLSQEI EYIAHLVPST YVFYGIKSAM LNNSGISDLY PEVGILLIFN ILVYMLTFRV LKKKRYI
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