Gene Mbar_A0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0549 
Symbol 
ID3626335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp659121 
End bp659519 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID637699441 
Producthypothetical protein 
Protein accessionYP_304110 
Protein GI73668095 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG TTCCAAGATT CTGGAGAAGT ATCGGCAGCA GGTATAACCT TGAAGGTACC 
CGTTGCAAAG AATGTGGGGA ACATTTCTAT CCCCCGCGCA ATTTTTGCGT AAACTGCAGG
CGTGTAGGTC ATATTGAACC TTACAAGTTC AAAGGCACTG GGAAAATAAT ATCGTATACA
ATAATCCATA CAGCTGCGGA AGGTTTTGAA GACCAGACTC CTTACACTCT TGCGATAATT
CAGCTAGATG AAGGTCCCCG CCTGACTTCG CAGGTAATTG GTGATCCTGA AAAAATTCAT
ATTGGAATGA GGGTAAGATC CGTATTCCGT AAGCTCGGAG AGGACGGTGA AGGTGGCATG
ATCTATTATG GCACCAAGTT CGTTCCTGAA GATGCATGA
 
Protein sequence
MSSVPRFWRS IGSRYNLEGT RCKECGEHFY PPRNFCVNCR RVGHIEPYKF KGTGKIISYT 
IIHTAAEGFE DQTPYTLAII QLDEGPRLTS QVIGDPEKIH IGMRVRSVFR KLGEDGEGGM
IYYGTKFVPE DA