Gene Mbar_A0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0505 
Symbol 
ID3624245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp606242 
End bp607966 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content44% 
IMG OID637699398 
Productdolichol-P-glucose synthetase 
Protein accessionYP_304067 
Protein GI73668052 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTTAC CAGCTTATAA TGAGGCAGCG AATATCGATA AGGCTGTCTT AGTTACAGCA 
GAAACACTTT TTAAAATAAC GGACCGTTTC GAGATCATCA TAGCCGAAGA CGGCAGCACG
GATGGTACAG ACCGGATAGC CTCCAGGCTC GCGGAACAGT ACGTTTATGT TGTCCATCTG
CATTCGGATA AACGACAGGG CCGGGGAAAA GCTCTTAACC GGGCTTTTAA GGCCGCTTCA
GGAGAAGTCC TCTGCTATAT TGACGTGGAC CTTGCGACAG ATATGAAGTA TCTGGAAAAA
CTGATCAGAG CTGTGAGCAC GGATGGCTAT GATTTTGCTA CAGGATCGAG AATGATGCCC
GATAGCGATG CAAAAAGGCC TTTTAAGCGA GAGTTTGCAA GCAGAGGATA TAATTTTCTG
GTGAGGCTAT TTCTGCATTC AAAACTCTAT GACCACCAGT GCGGTTTTAA GGCTTTCAGG
AGAGAAGCTC TCTTTGAACT TAGTGAGGAT GTTGAGAATG AACACTGGTT CTGGGATACC
GAAGTACTTG TCAGAGCCCA ACACAAAGGA TATAGGGTAA TGGAATTTCC GGTTTACTGG
AGGCACGGAG GGTCAAGCAA GGTTAATCTG GCAAAAGATG TAAAAGGAAT GGGGTCCGAG
ATATTCCGAC TCTGGCGGGA ACTCTCATTT CCTCTCGAAG TTTCAGGAAA AGGAAAATTC
TTTTTAACAG CTACCCTTGC AATTCTGATA CTTGCGTTTG TCGCAACCTT CCTGGGCGCA
TCCGATATTC TGGAAAATGT GAAGCAAGCA TCCTTCAGGA CTCTGGTTCT AGCCGCTCTG
GTATACTGTG TTTCCTGGCC TTTAAGAGGA GTTCGCTTCC AGCAGATCCT TAACAGGCTT
GGAAATCAAT ACGGGCTTAG GTTTCTTACA GGCAGCATTT TTATCAGCCA ATCCGCAAAT
GTAATTCTTC CGGCACGGAT AGGAGATCTG AGCAGGATGT ATATCCTGAA AAAAAGCAAG
GACCTTGCTT TTACAACTAG CTTCTCCTCG ATAACCGTAG AAAGAGTTTT TGATATAGTT
GCAATAACTT CCATAGCAAT ACTTGCATCT TCAGGTGCTG CATCCCGTTT TGAACTTGAT
CCCTGGATGG AATCCCTGAT AAGGCTGTCC GGACTTGCAG TAGTGCTTTT TTTCTCAATT
ATCTTTATTG TTTCTTTCCG AGAAGGCAAC ACAAGAAAAA GATTGGAAAT GGAAAATTCC
CAAAACGGGT TCTCTGGAAA GATAAAGATT TTTGCCTCTA CTTTTTTACA CCAGATAAGC
GTCGTTGCCG TACGTCCAAG CTCGTTTCTG GCAGTGACGG CCTCTTCTCT TCTGATATGG
GGAATAGATA TATTCACCTG TTTCCTTGTC CTTAAATCTT TTCCGACAGT AGGAGAAAGT
CTCTCGTCCA CATATATGAT ATCACTAATT TTCCTGGCTG TAGCCCTGGG AAATATTGCA
AAAATCTTTC CGATAACACC TGGAGCCATA GGAACATATG AAGTTGCCCT GACTGCAGTT
TTCGGGCTTG GTGGAATCAA ACCGGAGATC GGATTTACGG TTGCCGTGCT CGATCATATT
ATAAAAAATT CAATTACTTT AATAGGAGGA GGTCTTGCCC TCTCTGAACT CGGGCTCAGG
TGGAGAGAAG TGCTTTGTAC TGATAAGGAT GTTTTGAAAG GGTGA
 
Protein sequence
MVLPAYNEAA NIDKAVLVTA ETLFKITDRF EIIIAEDGST DGTDRIASRL AEQYVYVVHL 
HSDKRQGRGK ALNRAFKAAS GEVLCYIDVD LATDMKYLEK LIRAVSTDGY DFATGSRMMP
DSDAKRPFKR EFASRGYNFL VRLFLHSKLY DHQCGFKAFR REALFELSED VENEHWFWDT
EVLVRAQHKG YRVMEFPVYW RHGGSSKVNL AKDVKGMGSE IFRLWRELSF PLEVSGKGKF
FLTATLAILI LAFVATFLGA SDILENVKQA SFRTLVLAAL VYCVSWPLRG VRFQQILNRL
GNQYGLRFLT GSIFISQSAN VILPARIGDL SRMYILKKSK DLAFTTSFSS ITVERVFDIV
AITSIAILAS SGAASRFELD PWMESLIRLS GLAVVLFFSI IFIVSFREGN TRKRLEMENS
QNGFSGKIKI FASTFLHQIS VVAVRPSSFL AVTASSLLIW GIDIFTCFLV LKSFPTVGES
LSSTYMISLI FLAVALGNIA KIFPITPGAI GTYEVALTAV FGLGGIKPEI GFTVAVLDHI
IKNSITLIGG GLALSELGLR WREVLCTDKD VLKG