| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0489 |
|---|
| Symbol | |
|---|
| ID | 3626603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 586436 |
|---|
| End bp | 587134 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637699382 |
|---|
| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
|---|
| Protein accession | YP_304051 |
|---|
| Protein GI | 73668036 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC CTTTTGTTTT TATAAATTCT GCTATGTCAG CCGACGGCAA ACTTTCAACA
AAGGAACGGA AACAGGTCCG AATCTCCGGG AAACTTGATT TTGAACGAGT CGACGAACTC
CGAGCCCAGG CAGACGCAGT TATGGTAGGT ATAGGAACCG TCCTTTCGGA CGATCCAAGC
TTAACCGTAA AGTCTCCAAA GAGAAAGGCA GCCAGGAAAG CCGCAGGAAA AAACGAAAAT
CCAGTAAGGA TTATTGTGGA CAGTTCAGCA AGGACTCCGC TAGATGCTGA TATTTTCAAA
AAAGGAGACG GGCTCAGGAT AATTGCTGTT TCAACTTCTG CTCCTGCCGA AAAAATAGAA
AAACTGGAAA AAAAAGCTCT TGTTATCAAG GCAGGGACTG AGAAAGTCGA CCTTCAGGAG
CTTGTAAGAG TATTAAAGAA AATGGGAATA AACATCCTCA TGGTCGAAGG AGGGGCAACC
CTCAACTGGG GAATGCTTTC TGCAGGCCTT GTTGATGAAA TCTACACCTT CGTAGGAAAC
TTTATTATAG GTGGCGCTAC AGCCCCAACT TTCACTGACG GAAAAGGATT TTCAGAAGCT
GAACTCCTGG AGCTTGAATT GTCTTCTGCT GAAACAATCG AAGAAGGGAT ACTTCTTAAG
TGGAAGGTCA AAGGAAAAAC AAATTATATT GTTTCTTAA
|
|---|
| Protein sequence | MDKPFVFINS AMSADGKLST KERKQVRISG KLDFERVDEL RAQADAVMVG IGTVLSDDPS
LTVKSPKRKA ARKAAGKNEN PVRIIVDSSA RTPLDADIFK KGDGLRIIAV STSAPAEKIE
KLEKKALVIK AGTEKVDLQE LVRVLKKMGI NILMVEGGAT LNWGMLSAGL VDEIYTFVGN
FIIGGATAPT FTDGKGFSEA ELLELELSSA ETIEEGILLK WKVKGKTNYI VS
|
|---|
| |