| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0473 |
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| Symbol | |
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| ID | 3624215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 568318 |
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| End bp | 569934 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637699366 |
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| Product | nickel ABC transporter, solute-binding protein |
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| Protein accession | YP_304035 |
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| Protein GI | 73668020 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA AATATATCTG GGCAATTATC GCGTCAGCAC TATCAGTAGT GCTGTTGCTG
AGTGGATGCA TCTCAAATCA AGCGTCAAAC AATACACAGA ACGAAATTTC TGATTCTTCA
GATACCACCG CCACGGCCGT CAGTAATCAG TCCGATTCCA TTACAATTAT GGTCTCTGGC
AAACTGAATC CGGAAGATGC CAGCCCGATA GAATCCAGCA CGGAAATGTG CCTTTATGAA
ATGGTGTACG AACCGCTGGT CAAATACGGG AAAGGCGGCG TGATTGAGCC TGAACTTGCT
GAGAGATGGG AAATCAGCGA TAATGGAACG CAGTATACTT TCTACTTACG TAAAGATGCC
AAATTTTCAG ATGGTACCAA CCTTAATGCG GACAGCGTGG TAAGCAGTGC AAAACGCTGG
AACCCCACAA GCTTTTCCAC GCCGCTTACA AATGTGGAGA AATTAGACGA CTACACGGTC
AGGCTGACAT TTAAGGAAAA CTGTTATCCT GTATTAATCG AACTGACCTA TCCACGGCCT
TTCCGCATCG CATCTGAAAA CTCATTTGAT GAAAACGGTA ACTTTGTAAA AATGATCGGT
ACAGGCGAGT GGATGGTGGA AAGTTATGTC CCTGAGGAAG AGGTGGTTAT GGTGCCCAAC
CCGTATTATT ACGGGACGAA GCCGAATATT AATAAGATAA CCATCAGAAA AGTTACCGAA
GGCGAATCAA GAATTATGGC ACTTCAAAGC GGAGAAGCTG ACCTTTCTCT AGCTGATCTG
CCTTCCGAAA GTAAATCGAT CATCGAGTCA TCAAAAAATC TTGGCGCTAC AACCACTGAA
GGCACATTGG GATTTTTCCT CATGCTAAAT CAAGAAAATA CCGTGTTACA GGATGAAAAT
GTCCGCCTTG CGTTAAATTA TGCAATGGAC AAAGACAGCA TCGTGGAAAA TATATTTGGA
GGCGACGCTG TTGCAGCAAA GGGCATTTTA CCTGATACAG TACCGTACGT CACTGATGAA
AACAGCAAAG GATACTCTTA TAACCCGGAA AAAGCGAAAG AACTGCTAGC AGGATCTGGG
TATACGGACA GTGATGGGGA TGGGATCGTT GATAAGGACG GTGTGCCGCT GTCCCTTAAA
CTTGTATTTC AGTCTGAGGA ATATGCAAGC TGGAAATCTA TGTGTGAATA CATGCAGGCT
GCGGCCAAAG AGGTCGGCAT TGATATTCAG CTTGAGCAAC TGGACACTTC GGCCTACTAT
GATGCGATCT GGAAAAACCG TGATTTTGAC ATGATTATTT ACCGCACATA TGAGGATTCA
TGGAATCCAC ACGGATTTTT GCGCTCCATG TTTTATCAGT CAGAGGGAAG CACGTCCGTA
TGCTGGTATG ACCCGCAGTT AAATACAGAT CTTGACGAAG TCATTAAAAC ACAGGACGAG
ACAACGCGTC AGGCAAAGTA TGATCAGATA TTTAAGCTGA TCAATGACAA AGCGCTTGTT
GTTCCTCTGT GCTATCCCAA CAAACAATAT GTATATAATA CCCGCCTGCA AAACGTGACA
GTCGCACCGA CGAGCTATGA AGGCATAGAG TGGCAGTTGA TCACTATGGA AAAGTAA
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| Protein sequence | MKKKYIWAII ASALSVVLLL SGCISNQASN NTQNEISDSS DTTATAVSNQ SDSITIMVSG
KLNPEDASPI ESSTEMCLYE MVYEPLVKYG KGGVIEPELA ERWEISDNGT QYTFYLRKDA
KFSDGTNLNA DSVVSSAKRW NPTSFSTPLT NVEKLDDYTV RLTFKENCYP VLIELTYPRP
FRIASENSFD ENGNFVKMIG TGEWMVESYV PEEEVVMVPN PYYYGTKPNI NKITIRKVTE
GESRIMALQS GEADLSLADL PSESKSIIES SKNLGATTTE GTLGFFLMLN QENTVLQDEN
VRLALNYAMD KDSIVENIFG GDAVAAKGIL PDTVPYVTDE NSKGYSYNPE KAKELLAGSG
YTDSDGDGIV DKDGVPLSLK LVFQSEEYAS WKSMCEYMQA AAKEVGIDIQ LEQLDTSAYY
DAIWKNRDFD MIIYRTYEDS WNPHGFLRSM FYQSEGSTSV CWYDPQLNTD LDEVIKTQDE
TTRQAKYDQI FKLINDKALV VPLCYPNKQY VYNTRLQNVT VAPTSYEGIE WQLITMEK
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