| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0343 |
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| Symbol | |
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| ID | 3626587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 398007 |
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| End bp | 399944 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637699235 |
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| Product | cadmium efflux ATPase |
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| Protein accession | YP_303907 |
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| Protein GI | 73667892 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA ACGCTTATAG TCGTACTAGA GGTTTTTGGA GTAGCATCCG TTATTTAATA
ACTCGTTATC AGGATTTTTT ACTTGATCCT GGAACATTGT TTACTGTGGC AAGCGGAGTT
TTGCTTATAA TAGCGATAGC TGCTTATCCA CAAAACATGC TGTCAGAAGG AAATAGCACG
GGTGAAGGTA GCTGGTTATA TTTACTATCC GCACTGGTTG GATCATCGTT TATATGGTGG
TCTGCTTACC AGGGGATTAA AGAAAGGGAC TTTACTGCTG ATATCCCGGT TACTATCGCA
ACAATTGCTG CTATTGCCAT CGGGCAGTAT TCAGCTGCTG CAGTCGTAGC CGTACTTTTG
CTTCTTGGGG GTATGCTGGA GGAACTTGTT TCTGCAAGAG CAGGAAAGGC ACTCGAATCT
CTGGCGAAAC TATTGCCTGA TAGAGTCACA GTCAGGCGTG ATGGACATGA TATTGTAGTA
TCTCTTGAGG AAGTTAAGGT AGGAGACACG ATCCTGGTCA AGTCGGGAGA ACGTATTGCT
GTTGACGGAA CTGTTATTTC AGGCACTGCT TCGGTAAATC AGGCTGCTAT TACCGGAGAG
AGTCTGCCAG TTGATAAACA GGAAGGAGAT AACGTTTTTG CAGGTACTCT TAATGAAGTA
GGCGCAATGG AAGTGCTGGC CACTAAAGTT GGAAGTGAAA CAACCATTGG ACAAATACAT
CGCTTGATTG AGGACGCGCA GATTCAAAAG CCAAAGATAG AGCGGCTCTT GAATAATCAT
GCTAAATTTT ATACGCCTAC TGCAATCATC TTAGGCGGCT TGCTCTGGTG GTGGAGTGGG
GATCTGACAC GAGCAATTAC TATGTTAATT GTATTTTGTC CATGTGTGAT GGTACTCGCT
ACACCTACGG CACTTGTGGC TTCGGTTGGC AACGCGGCGT TAAGAGGCAA TCTTATTAAA
AAAGGAGCTA CGATAGAATC TATGGCCAGG ATAGATACTG TTATTTTTGA TAAGACAGGG
ACACTTACTC ACGGTGAACC AAAACTTGCC AGCGTTATAG CATTGAACAA CAATAAAGAT
GAAGACTTAT TGTTATTGGC TGCAATTGCA GAGAAGTTCA GTGAGCATCC GCTTGGAAAA
GCTGTTGTCA AAGCTGCTGA AGAAAAGGGG TTCTTAATAC AGGATCCGGA ATCATTTGAA
TCCATATCAG GAACCGGCAT AAAGGTTAAA GCCAAAGGAA AAAGCATCTT TGTAGGTCGT
CTGAAGCAAG CTTCTGAATT TAATATATCA ATCTCTCATA AAGCTGAAGA AATCATTAAA
AAACAATCTC AACTGGGCCG TAATGTAGTC ATGATAGGAA TTGATAACGA AATCGCAGGG
TTGCTAACAT TTGAGGATAG AATTAGGCCG GAGTCAAAAA AGTCCATTGA GAACCTTCAT
AAACTCGGAA TAAAGACAAT AATGATTACA GGAGACAGCA AAGTAGTTGC GGAACAGGCA
GCTAAAACCC TTGGTATAAA TGAAATATAT GCTGAAGTAA TGCCTCAGGA AAAAGTCGAA
ATTGTGAAAC GTCTACAGCT TGAAGGTCAT AAAATTATCT TTGTAGGCGA TGGTGTTAAT
GATGGTCCGG CACTTGTCAC GGCTGATGTA GGAATAGCTA TGGGGCTTAC AGGAACAGAT
GTGGCAATAG AGACAGCAGA AGTTGGACTA TTATCCGATG ATCTTTTAAA AATTCCATAC
CTTATAAGCG TATCCAAGAA GGCGATAAGC ACTATCTGGC AAAACGTTGT ATTTTCTCTT
AGCGTCCTCT CAATGGCGGT TATATTGACT ATACCGGGCA TACTTACACC TGTAACAGGA
GCATTATTAC ACGAACTCTC ATCAATTCCA GTGATAATGA ACTCAGCAAG ATTAATTACA
TATAGTCCCA AAGATTGA
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| Protein sequence | MMDNAYSRTR GFWSSIRYLI TRYQDFLLDP GTLFTVASGV LLIIAIAAYP QNMLSEGNST
GEGSWLYLLS ALVGSSFIWW SAYQGIKERD FTADIPVTIA TIAAIAIGQY SAAAVVAVLL
LLGGMLEELV SARAGKALES LAKLLPDRVT VRRDGHDIVV SLEEVKVGDT ILVKSGERIA
VDGTVISGTA SVNQAAITGE SLPVDKQEGD NVFAGTLNEV GAMEVLATKV GSETTIGQIH
RLIEDAQIQK PKIERLLNNH AKFYTPTAII LGGLLWWWSG DLTRAITMLI VFCPCVMVLA
TPTALVASVG NAALRGNLIK KGATIESMAR IDTVIFDKTG TLTHGEPKLA SVIALNNNKD
EDLLLLAAIA EKFSEHPLGK AVVKAAEEKG FLIQDPESFE SISGTGIKVK AKGKSIFVGR
LKQASEFNIS ISHKAEEIIK KQSQLGRNVV MIGIDNEIAG LLTFEDRIRP ESKKSIENLH
KLGIKTIMIT GDSKVVAEQA AKTLGINEIY AEVMPQEKVE IVKRLQLEGH KIIFVGDGVN
DGPALVTADV GIAMGLTGTD VAIETAEVGL LSDDLLKIPY LISVSKKAIS TIWQNVVFSL
SVLSMAVILT IPGILTPVTG ALLHELSSIP VIMNSARLIT YSPKD
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