| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0306 |
|---|
| Symbol | |
|---|
| ID | 3626821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 359947 |
|---|
| End bp | 361317 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637699198 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303870 |
|---|
| Protein GI | 73667855 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01908] CRISPR-associated CXXC_CXXC protein Cst1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00024909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA GCTTTCTTTA TACATTTACT GGAAATCCTT TTGTAGACTC TGGGATCTGG
GCTATATGCG AGTGGTCAGG CAGAAAAAAG CCTGAAGATA TAAAAATTGA AGATGTAAAG
AAGATAGCAC ATGATGTAAT CCCTATATAT TTGAGTCTGA AATGGTCAAA GAGTCTTTAT
TCGGTTTTTC CGAATAATGC GGTTACCAAT CCTTCTGTGA AAAATAAAGA TAAAAAGCTG
CTTGAGTCTT TAGAGAAGTT AATCGGTCAG GTTGAGTCCC TGGAGAAATC AGAGAAATCG
GGGAACTGTA TCTCTTGTGG AAAATATAAT GTAGAGCAAA CCAGGACGAA AACAGAAATT
CCTTTAATAG GTTCAGGTAC ACTAATTAAC TTTTTTCCGT ATGGTCAGAA AGGGGCTGAC
TACTGTCCGG CCTGTACGCT TGCAGTTCAA TTTTCTCCTC TTGTTTTTTA CGCCTGTGGA
AAACTTTTGC TAATCCACTC CAATTCTAAT AAGGTCATGC ATTACTGGGT AGAAAAGGCA
GTAAAGGACA TTCGAAGGCA GATTTTGGCA AATAGCTATA GTGGTTGTTT TGATGAAGGT
TACAAAAATC CTGTTAATGC TCTTTTTCAT ATAATTGAGG ATATTATTAT CCAGTACGAC
GAAGACTGGG TTGAGGAAAA TCCCTCTATA AACATGTATC ATTTTACAAA TTTTAATCAG
GGACCTGATC TTGATATATA TAGAGTTCCA ACCCCTGTGT TCAGATTTTT GGCTTGTGTT
AAAGACCCTG AATGGTTTAC AGAATGGAAA AAAATTGTCA GAAGGGGCTA TTTTAATTGG
AATAAAATTA AGGAAGGAGA CGACTACAAG AACAGAGGGA ACTCTGTTTA TATAAATCTA
TTAAAAGGCC GCTCCATTGT GAAATATTTT ATTGATAACA AAAACCGGCA GGTATACGGA
GATTGGGAAC TATTGGAATT TTACTTAAAG GAGGTAAGAA ACATGGGTAG TAAGAGATTG
GATACACTCA AAAGAGTTGG GGACAGCATC TCAGAGTACA TAAAAGATAC TCAAAACATA
AAAAGATTAA ATCAGCTTGA AATGGCAAGA AATTTTGCAT CATTCAGGAA TCAATTGAGG
ATTATCGAAA AAGACCGAAT AAATCGAAGT GTTCAAGACC CGCTTTTTAC TCTTGAAGAG
TTTATGGACG ATCTCTTTCC TGAAGGGAAT CTGGGTTGGA GAGAGACTCA GGATCTTTTG
CTCTTCAGAA TTTATGAAAA TCTACACAAC TGGTTGGTTG AACATGATAC CTTGAAGTCT
AAACTTATTT CTAGCGACGA AGAAGAAATG GGATTACTTG AGGAGGAATG A
|
|---|
| Protein sequence | MSQSFLYTFT GNPFVDSGIW AICEWSGRKK PEDIKIEDVK KIAHDVIPIY LSLKWSKSLY
SVFPNNAVTN PSVKNKDKKL LESLEKLIGQ VESLEKSEKS GNCISCGKYN VEQTRTKTEI
PLIGSGTLIN FFPYGQKGAD YCPACTLAVQ FSPLVFYACG KLLLIHSNSN KVMHYWVEKA
VKDIRRQILA NSYSGCFDEG YKNPVNALFH IIEDIIIQYD EDWVEENPSI NMYHFTNFNQ
GPDLDIYRVP TPVFRFLACV KDPEWFTEWK KIVRRGYFNW NKIKEGDDYK NRGNSVYINL
LKGRSIVKYF IDNKNRQVYG DWELLEFYLK EVRNMGSKRL DTLKRVGDSI SEYIKDTQNI
KRLNQLEMAR NFASFRNQLR IIEKDRINRS VQDPLFTLEE FMDDLFPEGN LGWRETQDLL
LFRIYENLHN WLVEHDTLKS KLISSDEEEM GLLEEE
|
|---|
| |