| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0279 |
|---|
| Symbol | |
|---|
| ID | 3624399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 328583 |
|---|
| End bp | 330220 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637699171 |
|---|
| Product | O-sialoglycoprotein endopeptidase/protein kinase |
|---|
| Protein accession | YP_303843 |
|---|
| Protein GI | 73667828 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity
[COG3642] Mn2+-dependent serine/threonine protein kinase |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAACA CGTTCATCCT TGGAATCGAG GGCACTGCCT GGAACCTGAG TGCCGCAATC
GTGACCGAAA CCGAGATTAT TGCCGAGGTC ACAGAGACCT ACAAACCCAC GGCCGGTGGG
ATTCACCCCA GGGAAGCAGC CCAGCATCAT GCAAAGTACG CAGCCAGCGT TATAAAAAGG
CTTCTTGCAG AGGCAAAAGA GAAGGGAGTC AAGCCTTCAG ATATTGACGG GATAGCTTTT
TCCCAGGGAC CTGGGCTTGG GCCGTGCCTG AGGACGGTTG CAACGGCAGC CAGAATGCTT
TCCATATCCC TTGGCATTCC ACTTATAGGT GTCAACCACT GCATTGCTCA TATTGAGATT
GGGATCTGGA GAACTCCTGC AATGGACCCT GTCGTTCTTT ACGTAAGTGG GGCCAATTCT
CAGGTTATTT CCTATATGGG AGGGCGGTAT AGAGTCTTTG GGGAAACCCT GGATATAGGG
CTTGGAAATG CCCTTGATAA ATTTGCGCGA GGGGCTAACC TACCGCATCC CGGAGGGCCA
AAGATTGAGG CATACGCAAA AAACGCAACG AAATATATCC ATCTTCCTTA TGTGATAAAA
GGCATGGACC TTTCCTTTTC CGGACTTTCC ACGGCAGCCA GTGAAGCCTT GAAAAAAGCT
CCTCTTGAAG ATGTCTGCTA TTCTTACCAG GAAACAGCTT TTGCAATGGT TGTTGAGGTT
GCAGAGCGAG CACTTGCTCA CACCGGAAAA AAAGAAGTCT TGCTGGCAGG AGGAGTTGGG
GCGAACACAA GGCTCCGGGA AATGTTAAAT GATATGTGCG AGGCCAGAGG CGCGAAGTTC
TATGTGCCCG AAAAACGCTT TATGGGAGAT AACGGGACAA TGATCGCATA TACTGGGCTT
CTAATGTATA AGTCCGGAAA CACTCTTTCC CTTGAAGATT CTCGCGTAAA TCCCAGTTAC
CGGACTGATG ATGTGAAAGT GACCTGGATC CAGGAAGAAA AGATGAAAAG AGTTCCTGAA
ATTTCCCCCG GAACTTCCCT CAAGCTTGGG GAACTGCTGG ACAATGGAGC CGAGGCTATT
GTTTACCTGG AAGAAGGGCC TGAAGGGAAG AAAATACTTG TTAAGGAAAG AGTCCCGAAG
GCTTACAGGT ATAAAGAGAT TGATGAGAGG ATCAGGACTG AAAGAAACCG GACAGAAGCC
CGCTTGATGT CTGAATCTCG ACGCCATGGG GTTTCTACGC CGATTATCTA TGATGTGGAA
GATTTCAAGC TTAAGATGCA GTATATTGAT GGTGTCCCCA TAAAATACCT GGTTACTCCT
GAGCTTTCAG AAAAAGTAGG AGAACTTGTA GGAAAACTAC ACAGTGCGGG TATAGTACAT
GGGGACCTTA CGACCTCAAA TATCCTGCTT GCAGGCGAGA GACTTTATCT CCTTGACTTC
GGGCTTGCTT ATTACGACAA AGGACTTGAG GCCAGAGGGG TAGACGTCCA TGTACTTTTC
CAGACTTTTG AGAGTACCCA CCGCAATCAT GAGGCCCTTA TCGAAGCTTT CAAAAAAGGG
TACCGGAGAA CTTTTATAGA TTCAGAGGAT GTACTCACGC GTGTTGAAGA GATAAAAAAG
AGGGCTCGTT ATGCATAA
|
|---|
| Protein sequence | MKNTFILGIE GTAWNLSAAI VTETEIIAEV TETYKPTAGG IHPREAAQHH AKYAASVIKR
LLAEAKEKGV KPSDIDGIAF SQGPGLGPCL RTVATAARML SISLGIPLIG VNHCIAHIEI
GIWRTPAMDP VVLYVSGANS QVISYMGGRY RVFGETLDIG LGNALDKFAR GANLPHPGGP
KIEAYAKNAT KYIHLPYVIK GMDLSFSGLS TAASEALKKA PLEDVCYSYQ ETAFAMVVEV
AERALAHTGK KEVLLAGGVG ANTRLREMLN DMCEARGAKF YVPEKRFMGD NGTMIAYTGL
LMYKSGNTLS LEDSRVNPSY RTDDVKVTWI QEEKMKRVPE ISPGTSLKLG ELLDNGAEAI
VYLEEGPEGK KILVKERVPK AYRYKEIDER IRTERNRTEA RLMSESRRHG VSTPIIYDVE
DFKLKMQYID GVPIKYLVTP ELSEKVGELV GKLHSAGIVH GDLTTSNILL AGERLYLLDF
GLAYYDKGLE ARGVDVHVLF QTFESTHRNH EALIEAFKKG YRRTFIDSED VLTRVEEIKK
RARYA
|
|---|
| |