Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0227 |
Symbol | |
ID | 3626008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 266214 |
End bp | 267623 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637699119 |
Product | putative oxidoreductase |
Protein accession | YP_303791 |
Protein GI | 73667776 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.967797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGAAT TAAATGGAGA AAAAACCGTA AAAGCAAAGA AAGAAAGGAC CCCTATGCCA GAACAGCCTG CGGAAGAGCG CAGAAAGAAC TTTAATGAGG TAGCTCTCGG CTACACGAAA GAAGACGCTC TTGCCGAAGC CTCTCGCTGT CTCTCCTGCA AGGAACCAAA ATGTGTTGAA GGCTGCCCTG TGAATGTGGA TATTCCGGGC TTTATCAAGC TTGTCTGCGA GGAAGACTTT GCAGGGGCAA TCGAGAAGAT TAAAGGCACA AATGCCCTTC CTGCCATCTG CGGTCGTGTC TGCCCCCAGG AAACTCAGTG CGAAGCTCTC TGTGTCCTAG GAAAGAAGGG ACAGCCAGTT GCTATCGGAA GGCTCGAACG TTTCTGCGCT GATTATGAGC GCCAGCAAGG GGTAAAGGTT CCGGAAGTTC CAGAGCCTAC AGGAAAGAAA GTAGCTGTTG TAGGTTCAGG GCCTGCAGGC CTCACTGCCG CAGCAGACCT TGCAAAGCTG GGTCACAAAG TCACTGTTTT TGAATCACTT CACAAAGCCG GCGGAGTTCT GAGTTACGGC ATTCCAGAGT TCAGGCTGCC AAAGGAAATT GTTCGGCAGG AAGTTGAGTA CATTGAGAAA CTCGGAGTCG AGTTCAAGCC CAATTATATA ATCGGCAGGA TCAAGACCTT AGACGAGCTC TGTGACGAAT TCGATGCGGT CTTCATGGGC ACTGGTGCAG GTCTGCCGAA TTTTATGGGA ATTCCAGGCG AAAACTTCAA CGGCGTTTAC TCTGCAAACG AGTTCCTGAC CCGTGTAAAC CTCATGAAAG CCTATGACCC TGAATATGAT ACCAGAGTCA GGCTTGGAAG GCACGTTGTG GTGGTTGGTG GCGGAAATGT GGCAATGGAT TCCGCCCGCT CAGCCCTCCG CCTGGGCGCT GAAGAAGTCA GCATAGTCTA TCGCCGTGGG GAAGAAGAGA TGCCAGCCCG CAGGGAAGAA ATCGAGCATG CTAAAGAAGA AGGCATAACC TTCAGGCTCC TTACAAACCC TGTCCGCATC CTTGGCGACG ATAAATTCAA TGTTACTGCA GTCGAATGTA TTAAAATGAA ACTCGGCGAG CCTGACAAAT CTGGCAGAAG AAGCCCTGTC CCTGTAGAAG GTTCGGAATT CACTATTCCT GCCGAAGTTG TTGTTATCGC CATAGGCACA TCCCCGAACC CCATGATCTT CAAAGGCTCG GAAGGCCTTG ATCAGAACAA AAAAGGAACT GTTGTCGCAG ACGAAGAAAC CGGTGCAACC TCCAAGTGCG GAGTCTTTGC AGGCGGAGAT GTTGTCACAG GCGCAGCAAC CGTTATCAGT GCAATGGGCG CTGGCAAGAA AGCCGCAAAG GCAATTGACG AGTATTTGAA AGAGCAGTGA
|
Protein sequence | MQELNGEKTV KAKKERTPMP EQPAEERRKN FNEVALGYTK EDALAEASRC LSCKEPKCVE GCPVNVDIPG FIKLVCEEDF AGAIEKIKGT NALPAICGRV CPQETQCEAL CVLGKKGQPV AIGRLERFCA DYERQQGVKV PEVPEPTGKK VAVVGSGPAG LTAAADLAKL GHKVTVFESL HKAGGVLSYG IPEFRLPKEI VRQEVEYIEK LGVEFKPNYI IGRIKTLDEL CDEFDAVFMG TGAGLPNFMG IPGENFNGVY SANEFLTRVN LMKAYDPEYD TRVRLGRHVV VVGGGNVAMD SARSALRLGA EEVSIVYRRG EEEMPARREE IEHAKEEGIT FRLLTNPVRI LGDDKFNVTA VECIKMKLGE PDKSGRRSPV PVEGSEFTIP AEVVVIAIGT SPNPMIFKGS EGLDQNKKGT VVADEETGAT SKCGVFAGGD VVTGAATVIS AMGAGKKAAK AIDEYLKEQ
|
| |