| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0152 |
|---|
| Symbol | |
|---|
| ID | 3626680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 169624 |
|---|
| End bp | 171543 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637699041 |
|---|
| Product | ech hydrogenase subunit A |
|---|
| Protein accession | YP_303717 |
|---|
| Protein GI | 73667702 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAA ACACCGTTAT GCTATTAATT ATAGTACCCC TACTGTTTTC GTTATTATTT
GTAGCTCTTC CCAAATCGCT ATACAGGTAT TTGGCTTGGG CTTTTTTCAT AATTGGAGTA
GCTTTATCAG TTAGTTTGGT ATTAGGTGGT ACTGGAGTAG TTCCGGTTGA AGGACCAAAT
TTCGCAATGT ATGAAAACAT TGTCCTTTTA CTCGAAGTAC TGGTAATACT ATATATTCTT
GCTGTGTCAG CAAAATATAA AAACTGGCCT ACACTTGGAC TTGGAATAAT TTCAGCAGCC
TTATTTGCTT ACACTTATGC CAATGTTCCA GGTGCCGAGG GTGCTTCTTT TAATATTGAT
CCACTGGCTC AGCTCATGAT CTTAATTGTG AATATAGTCG GTACTGCGAT TATTTTATTC
GCAACTGGAT ACATGGACCA GTATGAGGAG CACAGACATC TTAATAGACA AAAGATATTT
TACTTTACAA TGAGCTTCTT CCTGGCAGCC ATGAATGGTC TGGTAATGTC TGACACACTA
GGATGGCTGT ATCTTTTCTG GGAACTAACA ACTCTGTGTT CATTCGTGTT GATCTCATAC
AACATGGATG AAGAAGGAAT CAACAACGGT TTCAGGGCTC TGTCTTTAAA CCTGGTTGGC
GGAGTTGCTA TGTCTATAGG CATAATTCTG CTTGCAACTA ACTATAATAT AAGTTCCCTT
ACTGGGATTG CAACTTACGC TGGAACTGAT GCAGTAGCTT TGGCCGCTTT AGCCCTTCCT
GTTGCTTTAC TCTGTATTGG AGGCTTTGCG AAATCTGCTC AGATGCCTTT CCATAGCTGG
CTCTTAGGCG CAATGGTAGC TCCAACTCCT GTTTCTGCTT TACTACACTC AAGCACGATG
GTAAATGCCG GTGTGTTTTT AGTTGTCAAG CTTGTACCAG CTTATGCTAA TACCTCCCTC
GGAACAGCTA TTGCAGTTTA CGGTAGCTTC ACCTTCGTTA TCTGTTCAGC TTTAGCCTTA
TCTCAAAGAA ACGCTAAAAG AGTGCTTGCT TATTCAACTA TTGCAAACCT GGGATTAATT
ATCGCAAGCG CCGGGATAGG CACACCTCTG GCTGTAGCTG CTTCGATGAT GCTTATTCTG
TTCCACGCCA TATCGAAAGG TCTCTTATTC CTGTGCACAG GTGAAATTGA GCACACCATA
GGAAGCAGAG ATATCGAGGA TATGTCAGGA TTAATTAAGA AGGCTCCTCT TCTCACTTCC
ATTGCAGCTC TGGGAATGGT ATCCATGCTA TTGCCTCCTT TTGGGGTATT GCTTACAAAA
TGGGTATCAA TGGAAGCTGC TTCAAACAAT CCTGTTGTGA TAATATTCAT AGTACTTGGA
AGTGCACTTA CCACAGTTTA TTACTCTAAA TGGCTTGGAA CAATCTTATC AACCAGCATG
GATAAAAATG CAGTTCCCCA TAAAAAACTG GAAACATATT TCCCACTATC GGTCCTTGGG
TTATCCATTA TAGGTACAAG TATCTTCATA TTTTCAATAT ATGATTACTT CATTAGACCT
CAGGTAGAAA TTCTACTCAA AGTTGCTCCT GCTGTTACAG GACAGGCTGG GCAGTTTACC
TCTGAAATAG GGGCATTTGC TTATGCAGCA ATATTTGCAG TGCTTGCTCT GGCTATTCTG
ATCTATCTCG CTACCAAGAA CATGTTCACA CCTCGTACAG CTGGCTATTA TATGTGTGGG
GAGAACAACC TTGAAAAGGA CAGATTAATG TTTAGAAATG GACTTTGCAG TTACGAAAAA
TGTAGTGTCT CCAACATCTA TCTCCAGAAT ATTTTTGGAG AAAGTAAACT TACAACATTT
GGATACGCAA TTTCCATAAT TCTGATTGTA ATTGCATTAG CAGGAGGAGT CGGATTATGA
|
|---|
| Protein sequence | MIENTVMLLI IVPLLFSLLF VALPKSLYRY LAWAFFIIGV ALSVSLVLGG TGVVPVEGPN
FAMYENIVLL LEVLVILYIL AVSAKYKNWP TLGLGIISAA LFAYTYANVP GAEGASFNID
PLAQLMILIV NIVGTAIILF ATGYMDQYEE HRHLNRQKIF YFTMSFFLAA MNGLVMSDTL
GWLYLFWELT TLCSFVLISY NMDEEGINNG FRALSLNLVG GVAMSIGIIL LATNYNISSL
TGIATYAGTD AVALAALALP VALLCIGGFA KSAQMPFHSW LLGAMVAPTP VSALLHSSTM
VNAGVFLVVK LVPAYANTSL GTAIAVYGSF TFVICSALAL SQRNAKRVLA YSTIANLGLI
IASAGIGTPL AVAASMMLIL FHAISKGLLF LCTGEIEHTI GSRDIEDMSG LIKKAPLLTS
IAALGMVSML LPPFGVLLTK WVSMEAASNN PVVIIFIVLG SALTTVYYSK WLGTILSTSM
DKNAVPHKKL ETYFPLSVLG LSIIGTSIFI FSIYDYFIRP QVEILLKVAP AVTGQAGQFT
SEIGAFAYAA IFAVLALAIL IYLATKNMFT PRTAGYYMCG ENNLEKDRLM FRNGLCSYEK
CSVSNIYLQN IFGESKLTTF GYAISIILIV IALAGGVGL
|
|---|
| |