Gene Mbar_A0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0116 
Symbol 
ID3625918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp129021 
End bp130202 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content42% 
IMG OID637699006 
Producthypothetical protein 
Protein accessionYP_303683 
Protein GI73667668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.967324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAAAA AAATAGGAAC AAATGGAATA GATATCAGAA AATGTAAATT AACCTTCGCG 
GCTCTAATCT GCATTTTCGC ACTTATTTCG GTATCAGCCG CGGTTTCAGA AAAAGGACTC
TGGGCTGCCT CTATTGAGAA AAACGGAGAC AGCGTCATTT TTGCAGACCA CGATGATAGC
CAAGACGAGG GAGGATGGAT TCAACTCAGC GGAGGACAAG AAATCCAGCT TCCACAACCA
CTTAGCTTTA TTTACAATGG GACCAACTGT GTTGAAAAGG CAGGAACTAT AGTTAAACTA
AACAAGGATA ATAACACGGA AGTGAACTAT ACATACCCAT ACGCCACACA TCCATTTTAT
ACTGACGGCC AGAGAGTAAC AATGACCTAT AATGGTCCTT CAGCTCTTAA GAATCAGAAA
GTGAATGTTT ACCTTGTCAA TGGGTCTAGT GTTAGTTCCG TCAAAAAAGC CATTGTTCTT
GCGGGTAACG AAAGCATAAA CCTGGGAGAA ATTTTCGGAG AAGGTACGGA TAATTCTTAC
ATCAGATTAT GCGCGACTCT GGACAAGAAA GGAGATCTGC TTAAACCAAT TACCTTCTAC
TCTCTTAAAC CCGGGAGTTA CGGCATCATT GTAACACTTG CGGACGACAA ATACAGAGAG
AACACCAGCA TGGAAAAGAA AGTTCTTTCA GCAACTGGCT TTGAAATAGT TAACTATGAA
CTGAAAACAA AGGCAGACAA CAATATTAAG GAAGGCGATA ACCTTGATGT TACAATGAGC
CTGAAAAAAG CACCTGCTGA TGGAGAGTTT ACATACGGTG CCCTGCTGAT AAATGAAGAA
GCCTACAGAG CTGAAATAAA CGTCAGCACC AATGGAACAA TAAATGGGAC CAATGCTTCC
ATCAACGATC TTGATATCAG AGACCTGGGC ATAAACTCAA CAAACTATAA GTCCAAATTG
AACAAAAGTG AACTTACAAA AGCAGCCCAG ACTCTTATTG GAGAAGGCAA CGGTACGATA
AGCATAGGCG ACAAAAATCA GGACACTCTT TCCCTGACAA CCTTCGACCT TGCGCCAGGA
GATTACATCC TCATTACAGG CGCCTATGAA CCTGGCAAAG GCCTTGTAGG CATAGACCAG
GATAAACTGA AAATAAGTAC AAAAGGAACC TCACCGATAT AA
 
Protein sequence
MKKKIGTNGI DIRKCKLTFA ALICIFALIS VSAAVSEKGL WAASIEKNGD SVIFADHDDS 
QDEGGWIQLS GGQEIQLPQP LSFIYNGTNC VEKAGTIVKL NKDNNTEVNY TYPYATHPFY
TDGQRVTMTY NGPSALKNQK VNVYLVNGSS VSSVKKAIVL AGNESINLGE IFGEGTDNSY
IRLCATLDKK GDLLKPITFY SLKPGSYGII VTLADDKYRE NTSMEKKVLS ATGFEIVNYE
LKTKADNNIK EGDNLDVTMS LKKAPADGEF TYGALLINEE AYRAEINVST NGTINGTNAS
INDLDIRDLG INSTNYKSKL NKSELTKAAQ TLIGEGNGTI SIGDKNQDTL SLTTFDLAPG
DYILITGAYE PGKGLVGIDQ DKLKISTKGT SPI