Gene Mbar_A0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0111 
Symbol 
ID3626233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp120221 
End bp123718 
Gene Length3498 bp 
Protein Length1165 aa 
Translation table11 
GC content33% 
IMG OID637699001 
Producthypothetical protein 
Protein accessionYP_303678 
Protein GI73667663 
COG category[R] General function prediction only 
COG ID[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAAAA AAACAGGGAT TTACAATGAA ATATTTAGCA GAAAGTGGAG ATTAATATTT 
ATTACTCTAG TTCTAATTTT TTCAGTAATT TCACTATCAG CTACAGGGGC GGAAAACAGA
ACCAACAGTC AGGCAAGAGA CAAAGTAGTA CATGAGTCAA ACATTGGAGT AAGTAACGAG
ACCGGGAAGA ATAATTGTTC GTACTGCATA GAAAGTGACG AAAAAAACGA TACAGGAAAA
GAATATTCAT ACTTCATGGG AAGTAACGAA GAAGATGAAA ACGAGGATGG ATATTCATAC
ATTATAGTAG ATGAAAATCA TAAAGATAAA TGCTCGTACT GCACTGAAGA TGAAGAAAAT
TTTGAACAAA AAGTAGGAGA AAACAAAAGC AAGGAAAATC AGAAAACAGT AGAAAACAGT
ACTAAATCAA AAACAGAAAC AGAAAATAAT ACAAAAACTC AAGAAACCAT AGAAAACAGT
ACTAAATCAA AAACAGAAAC AGAAAATAAT ACTAAATCAA AAATAGAAAC AGTAGAAAAT
AATACTAAAT CAAAAACAGA AACAGAAAAT AATACTAAAT CAAAAACAGA AACAGTAGAA
AATAATACTA AATCAAAAAC AGAAACAGAA AATAATACTA AATCAAAAAT AGAAACAGTA
GAAAACAGTA CTAAATCAAA AACAGAAACA GAAAATAATA CTAAATCAAA AATAGAAACA
GTAGAAAACA GTACTAAATC AAAAACAGAA ACAGAAAATA ATACTAAATC AAAAACAGAA
ACAGAAAATA ATACTAAATC AAAAATAGAA ACAGTAGAAA ACAGTACTAA ATCAAAAACA
GAAACAGAAA ATAATACAGA AAATCAGGGA ATAGTAGAAG ACATTGAGCA AGAGACTGAC
TTAGCTGACT CTATTTTACA TTACAAAGTA TATAAGGTAG AAAACAGCCA AGAAAAGATT
AAAGAAAATG AATCAAAAAG TTCAGAAAGC AATGTATCTG ACTGGTATAA AAAAATAGCA
GTAAATAAAA CAATTGCTCA AGAAAACGAA TCAAACAGTA ACGATACAGA TAGCAAAGAA
AATATCGAAG AAAATGATTC AAAAAGTTCA GGAATTAATG TAACTGATTG GTATAAAAAA
ATAGCAGTAA ATAAAACAGT TGCTCAAGAA AACGAATCAA ACAGTAACGA TACAGATAGC
AAAGAAAATA TCGAAGAAAA TGATTCAAAA AGCTCAGAAA GCAATGTATC TGACTGGTAT
AAAAAAATAG CAGTAAATAA AACAGTTGCT CAAGAAAACG AATCAAACAG TAACGATACA
GATAGTCAAG AAAATATCGA AGAAAATGAT TCAAAAAGTT CAGAAAGCAA TGTATCTGAC
TGGTATAAAA AAATAGCAGT AAATAAAACA GTTGCTCAAG AAAACGAATC AAACAGTAAC
GATACAGATA GTCAAGAAAA TATCGAAGAA AATGATTCAA AAAGTTCAGG AATTAATGTA
TCTGATTGGT ATAAAATAAT AGCAGTAAAT AAAACAGTTG CTCAAGAAAA CGAATCAAAC
AGTAACAATA CAGATAGCAA AGGAAATATC GAAGAAAATA ATTCAAAAAG TTCAGAAATT
AATGTATCTG ACTGGTATAA AATAATAGCA GTAAATAAAA CAGTTGCTCA AGAAAACGAA
TCAAACAGTA ACAATACAGA TAGCAAAGGA AATATCGAAG AAAATGATTC AAAAAGTTCA
GAAATTAATG TAACTGATTG GTATAAAAAA ATAGCAGTAA ATAAAACAGT TGCTCAAGAA
AACGAATCAG ACAGTAACAA TACAGATAGC AAAGAAAATA TTGAAGGAGA TGACTCAAAA
AGTTCAAAAA GTGATGGATC TAACTGTAAA TGCAAAATAA TAACAGTAAA TAAAACAGCC
ATCCAAGAAA ATAAATCAGA CAGTTCAGAG AGCAATGTAT CTAATTTGAA ATATAAAACA
ACAACAGTGA ATAGAACAGT CACCCAAAAC AATACCAAAA CGAAAAATGA AACAAAAACT
GAAACCGTCA ATGAATCGAA AAGTCTGAAA AGTACGGAAG TGGAAACTGA AAACAAAACC
AAAATCTCCA ATGGAAACTC AAATGGAACT TCCGATGGAA ACTCAAACGG AAACTTAAGC
GGAAACTCCA ATGGAAACTC AAACGGAAAC TTAAGCGGAA ACTCCAATGG AAACTCAAAC
AGTACAAAAA GTGTGGAAAG TGAAGTAGTG AGTCCTGAAG TAAACTGGAC GAATAATCTG
AGAAGTCAGA AAGTAAATGA AATAAAAGTA TATAACTGGA CAGACAGTCA GGGAAATAAG
TCAGTAACAT CTGAGGTAAA AACAGAAAAA AATAGTTGGA ACAATATTAA ATATATACTG
TCGTATTCCT ATCCCCTTCG TTCGTTTTAT ACCACAAACG ATAATGTGAA TATAAGCTAT
AATGGACCTG AAACTTTAAG ATATCAGAGT GTGGACATTT TCCTCATCAA GGAACGCAGC
CCGAGTTCTC CGGAAAATGA GATTTCATAT GGTATGAATG AAAGCACGAT TAGTCTTGAA
GACGTCTTAA ACAATGATAC AGAAGCTTAT GTTAAGATAC CTGCGACTCT GAACAAAGAA
GGAGACCTTG ATCCACTGAG ACTGGACCCT CTTCAGGCAG GCCATTACTG GATCCTTATA
ACCCCTGCAG GAAACGAAAC GGAAAAAACA GTATCTGAAA AAGAAGTCCT TTTAGCAAAA
TATTTTGAAG TTCTCAAGTA TCAAATAGAG GCCAGATCTC CGTCTGCCAT TCAAAAAGGT
GAAAACTTAG AAGTCAACCT GGATCTGGAA AATGAACCTG CTGAGAAGAA TTATACTTAC
TGGGCTGTAC TGATAAAAGA TGGTGCTTAT ACAGCATTTG AAGGCACGAA CCCAAGATGG
AGAATGACTA CTGGAATTAG GCCTATCGTA AACGGAGTTG ACCTTATCAA GCGTTTGGAA
ACAAATTTGA GTAGGTATGA ATCCGATAAT GAGAAAGACG AACTTAAGAA TGAGATCCAG
ACCCTTATAG GGAAAGATAA TGGAACGATA AGCATAGGTG AGAAAAACCA GAGTAAGCTT
TCCCTGAAAA GCCTGGATCT TCCACCAGGA GACTACATCC TCCTTACAGG AGCCTATGAA
GATAATAAAG GTTTGATAGG TACAACCCAG AAAAAGATGA GAATATCCCC CGAAGACTTA
TACGGATTGG GTTTGACACC CAGCTCAGAA AATACATTGG GTGATGAATC TTCGACGAAA
TTCGAAACCT CTCCACTTAT GGAAATTAAG TCTATTCTCG AAAATCCAAA ATCATTCATA
TTTGAAGATG TCAAACCATA CATTCAGGCA AACTCATTAG CAGAAGTCTT AAGAAATCCT
CCAAAACTTC CCTCGTTCCT GTTGGGCTTT GCAGTAACTC TACTGATAGG ATTTGCAGTA
CTGAGGAAAA AGAAATGA
 
Protein sequence
MKKKTGIYNE IFSRKWRLIF ITLVLIFSVI SLSATGAENR TNSQARDKVV HESNIGVSNE 
TGKNNCSYCI ESDEKNDTGK EYSYFMGSNE EDENEDGYSY IIVDENHKDK CSYCTEDEEN
FEQKVGENKS KENQKTVENS TKSKTETENN TKTQETIENS TKSKTETENN TKSKIETVEN
NTKSKTETEN NTKSKTETVE NNTKSKTETE NNTKSKIETV ENSTKSKTET ENNTKSKIET
VENSTKSKTE TENNTKSKTE TENNTKSKIE TVENSTKSKT ETENNTENQG IVEDIEQETD
LADSILHYKV YKVENSQEKI KENESKSSES NVSDWYKKIA VNKTIAQENE SNSNDTDSKE
NIEENDSKSS GINVTDWYKK IAVNKTVAQE NESNSNDTDS KENIEENDSK SSESNVSDWY
KKIAVNKTVA QENESNSNDT DSQENIEEND SKSSESNVSD WYKKIAVNKT VAQENESNSN
DTDSQENIEE NDSKSSGINV SDWYKIIAVN KTVAQENESN SNNTDSKGNI EENNSKSSEI
NVSDWYKIIA VNKTVAQENE SNSNNTDSKG NIEENDSKSS EINVTDWYKK IAVNKTVAQE
NESDSNNTDS KENIEGDDSK SSKSDGSNCK CKIITVNKTA IQENKSDSSE SNVSNLKYKT
TTVNRTVTQN NTKTKNETKT ETVNESKSLK STEVETENKT KISNGNSNGT SDGNSNGNLS
GNSNGNSNGN LSGNSNGNSN STKSVESEVV SPEVNWTNNL RSQKVNEIKV YNWTDSQGNK
SVTSEVKTEK NSWNNIKYIL SYSYPLRSFY TTNDNVNISY NGPETLRYQS VDIFLIKERS
PSSPENEISY GMNESTISLE DVLNNDTEAY VKIPATLNKE GDLDPLRLDP LQAGHYWILI
TPAGNETEKT VSEKEVLLAK YFEVLKYQIE ARSPSAIQKG ENLEVNLDLE NEPAEKNYTY
WAVLIKDGAY TAFEGTNPRW RMTTGIRPIV NGVDLIKRLE TNLSRYESDN EKDELKNEIQ
TLIGKDNGTI SIGEKNQSKL SLKSLDLPPG DYILLTGAYE DNKGLIGTTQ KKMRISPEDL
YGLGLTPSSE NTLGDESSTK FETSPLMEIK SILENPKSFI FEDVKPYIQA NSLAEVLRNP
PKLPSFLLGF AVTLLIGFAV LRKKK