Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_3964 |
Symbol | |
ID | 4653201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008739 |
Strand | + |
Start bp | 64206 |
End bp | 65348 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639809818 |
Product | phage integrase family protein |
Protein accession | YP_957157 |
Protein GI | 120537100 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00221994 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAGAA ATGGATCCTA CGAAAGCCAG GGTAATGAGC GTAAACGGGG CCTGGAAGAT GAGAGCTTGT CCCATTCTCC GGGGCACCCA GACCAGTCAA AGCTCAATAA ATACCTAGAA GCTGCGCGGA GCACCAACAC CGAGATCGCC ACCGCTAACG CGATTAAGCA TTATCGGGAA GTGTATAAAG GCCCCTTCCC TTGCACGCCA CATGATCTGT CTCTTTATCT GAGTCATTAT GCCGGGACAC TGAAAGTGGC GACGTTGGAA CAGCGCCGCT CATTGATTGG CAAGTGGCAC GAAGAGATGA CCGGCTCTAA CCCGAACAAG AGCAAACTCG TTCTAGAAAC CATGCGAGGA ATTCGGAAAT TCCATAATGC CAGCCAGAAA CAGGCGAATG CTCTGCCTTT AGACACCCTC AGGGAAACAG TGAGCTTTCT TGCGGATAAA AGAAATCGTC AAGAAGGTGC GGCTAATCGG GAGTGGCGCC GTTATTCGCG GGACAGGGCC ATGCTACTCA CGGCATTTTG GTTTGGTCTT CGAGGGAGCG AATTGGTGAA TATACGGCTT TCCCACCTGA CTTTTGATTG GAGAAGTCAT CCGCCAAAAT TGACGGTGAT GATTCCCACC TCAAAGGCCG ACCGCAGCAG TTCGGGGCGA GAGGTAACGC TTGTTGCTTT ATCGGAACTA TGCCCTATTT ACGCAATTTC CGAGTGGATC GAGGACAGAT TTGGGGGACT CGATATCGGC TCTGAAACAA TTAAAGACCA GTTCTTGTTC AGTAAAGTCG ACCGCTGGGG GGCGGTTTGG TCTGATGGCC TTAACTCGAA TTCCATCAAT AAAATTTTGA AGAGGGTTTT TGACGAGGCG CGCGAGAATG GAGCGCACAT TCCGGAACAT TTCAGTTCGC ATTCGATGCG TCGTGGCGTC TCAGATTGGT TGATTGATCA GGGCGCGTCG TGGTCCCAAT TAATGCATTG GGTCGGCTGG CGAGATGTCC GGTCGGCCAG AAAATACGTA GACTCAAAAG AGAGTCTGCC TTCGATCTTT ATGGACAACA ATCAGCGACT GAGCGTAGAA CAATCAAACA AAGATAAATG TCACGGTCAA CCTAGTAAGA TTGGGCATGA TGAAAACCGG TAG
|
Protein sequence | MTRNGSYESQ GNERKRGLED ESLSHSPGHP DQSKLNKYLE AARSTNTEIA TANAIKHYRE VYKGPFPCTP HDLSLYLSHY AGTLKVATLE QRRSLIGKWH EEMTGSNPNK SKLVLETMRG IRKFHNASQK QANALPLDTL RETVSFLADK RNRQEGAANR EWRRYSRDRA MLLTAFWFGL RGSELVNIRL SHLTFDWRSH PPKLTVMIPT SKADRSSSGR EVTLVALSEL CPIYAISEWI EDRFGGLDIG SETIKDQFLF SKVDRWGAVW SDGLNSNSIN KILKRVFDEA RENGAHIPEH FSSHSMRRGV SDWLIDQGAS WSQLMHWVGW RDVRSARKYV DSKESLPSIF MDNNQRLSVE QSNKDKCHGQ PSKIGHDENR
|
| |