| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3894 |
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| Symbol | trmE |
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| ID | 4654674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 4322679 |
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| End bp | 4324049 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639813870 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_961149 |
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| Protein GI | 120556798 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCAG CGACTGACAC CATTGCCGCC ATCGCCACTG CCCCGGGCCA GGCCGGGGTG
GGGATTGTCC GGGTGTCCGG ACCCAGGGCC ATGGCCATTG CCCGCACCAT GCTGGGCTTT
GAGCCAAAAC CCCGATACGC CCACTACGGC CCGTTCCGGG ATCGTCAGGG AGAGCTGATT
GATGAGGGCA TCGGTCTGTA CTTTCCCAAC CCGCACTCCT TTACCGGCGA GGATGTGTTC
GAGCTTCAGG GCCATGGCGG CACGGTGATT CTGGATATCC TGTTACGGGA AGTCTGCAGC
CTGGGGGCCC GGCTGGCCCG GCCTGGTGAA TTTTCCGAAA GAGCGTTTCT CAATGACAAA
CTGGACCTGG CCCAGGCTGA GGCCATTGCT GATCTGATTG AAAGCAGTTC GGAACAGGCG
GCCCGCTGTG CCGTGCGTTC CATGCAGGGG GTGTTCTCCA AACGTGTGGA TAACCTGGTG
GAGGCCATCA CCCATCTGCG CATCTACGTG GAAGCGGCCA TCGATTTTCC GGAGGAAGAG
ATCGATTTCC TGGCCGATGG CAAAGTTGCT TCTGACTTGC AGGGCCTGCT GGAGCAGGTG
CAGCAGATTC TCGGTGAAGC CCAGCAAGGC ACCATTCTGC GGGACGGCAT GAAAGTGGTT
ATTGCCGGCC GGCCCAATGC CGGCAAATCC AGCCTGCTGA ACGCCCTCGC GGGGCGGGAG
GCTGCGATTG TCACCGCCAT CGAGGGCACA ACCCGGGATG TGTTGCGGGA ACATATCCAC
ATCGATGGTA TGCCGCTGCA CATTATTGAT ACCGCCGGCC TGCGGGACAG CCCGGACGAA
GTGGAACAGA TTGGTATTGC CCGGGCCTGG GAAGAAATCC GACAGGCCGA TCGTATTTTG
CTGATGGTGG ATGCCACCAC CACCGACAAA ACCGAGCCCC ATGAAATCTG GCCGGATTTT
ATTGATCAAC TGCCCAGGAG TGCACCGGTG ACGGTGATCC GGAACAAGGT GGATCTGTCT
GGTGAACCGT TGGGTATCAG CGCCGAGTCG CATCAGACCG CTCCGGTGAT TCGTCTGGCA
GCAAAAGCTG CGGAGGGTCT GGAGGTTCTG CGTGAGCATC TGAAAGAATG CATCGGCTTT
GCCAGCACCA CCGAAGGTGG CTTCCTGGCC CGGCGCCGGC ACCTGGATGC CCTGGAACGT
GCCCGGGATT CCCTGCTGCA AGGCCAGACT CAGCTGGAAG GTTACGGCGC CGGTGAATTG
CTGGCCGAAG ACCTCCGGGC CGCTCAGGAT GCCCTGGGGG AAATCACCGG GCATCTGACC
CCGGATGAGC TTCTGGGGAA AATATTCAGC AGTTTCTGCA TCGGGAAATA A
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| Protein sequence | MQPATDTIAA IATAPGQAGV GIVRVSGPRA MAIARTMLGF EPKPRYAHYG PFRDRQGELI
DEGIGLYFPN PHSFTGEDVF ELQGHGGTVI LDILLREVCS LGARLARPGE FSERAFLNDK
LDLAQAEAIA DLIESSSEQA ARCAVRSMQG VFSKRVDNLV EAITHLRIYV EAAIDFPEEE
IDFLADGKVA SDLQGLLEQV QQILGEAQQG TILRDGMKVV IAGRPNAGKS SLLNALAGRE
AAIVTAIEGT TRDVLREHIH IDGMPLHIID TAGLRDSPDE VEQIGIARAW EEIRQADRIL
LMVDATTTDK TEPHEIWPDF IDQLPRSAPV TVIRNKVDLS GEPLGISAES HQTAPVIRLA
AKAAEGLEVL REHLKECIGF ASTTEGGFLA RRRHLDALER ARDSLLQGQT QLEGYGAGEL
LAEDLRAAQD ALGEITGHLT PDELLGKIFS SFCIGK
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