| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3840 |
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| Symbol | |
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| ID | 4655315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 4260689 |
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| End bp | 4262374 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639813817 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_961096 |
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| Protein GI | 120556745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA ACCAATACGA CTACATCATT GTGGGTGCGG GCTCAGCCGG TTGTGTGCTG
GCTAACCGTC TGACCGAGGA CAGTGAAAAC CGGGTGCTGC TGCTGGAAAC CGGTGGCAGT
GACAAGAGCA TCTTCATCCA GATGCCCACC GCGCTATCCA TTCCCATGAA CACCAAAAAG
TACGCCTGGC AGTTCGAGAC CGAGCCGGAG CCGTATCTGG ACAATCGCCG CATGCATTGC
CCCCGGGGCA AGGTGCTGGG TGGTTCGTCA TCCATCAATG GCATGGTGTA TGTCCGTGGC
CATGCCCGGG ATTTCGACGA GTGGCAGTCT GAAGGTGCCG ACGGCTGGAA CTACCGTAAC
GTGCTGCCCT ATTTCAAGAA GGCGGAAACC TGGGCCTTCG GCGGCGATGC CTACCGGGGG
AATTCCGGCC CCCTGGGTGT GAACAACGGC AATAACATGC GCAACCCGCT GTATACAGCG
TTCATCCGGG CCGGCGTCGA TGCCGGTTAT CTGGAGACCG ATGATTACAA CGGTGCCCGC
CAGGAAGGTT TTGGCGCCAT GCACATGACC GTGAAGAACG GTCGCCGCTG GTCCACCGCC
AACGCCTACC TTCGCCCGGC CATGGCGCGG CCGAATCTGA CGGTGGTCAC CCATGCCCTG
GTGCATAAGG TCCTTCTGGA GGGCAAAACC GCCACCGGCG TGCGCTATGA GCAGGGCGGC
CAGGTGCATG AGGCCAAAGC CGCCAAGGAA GTGATTCTGT CGGCCGGTTC TATTGGCTCG
CCACATTTGT TGCAGCTTTC GGGTATTGGC AAGCGCGAAG TGCTGGAGCA GGCCGGTATT
GAGGTGAAGC ATGAGCTGCC GGGCGTGGGT GAGAACCTGC AGGATCACCT GGAGTTCTAC
TTCCAGTTCC GCTGCCAGAA GCCGGTCTCC CTGAATGGCA AACTGGACTG GTGGAACAAG
CTCAAGATCG GGGTGCGCTG GATTCTGCGC AAGGATGGCC TGGGGGCCAC CAACCATTTC
GAGTCCTGTG GTTTTATCCG CTCCAAGGCC GGCGTTGAAT GGCCGGACCT GCAATACCAT
TTCCTGCCGG CGGCCATGCG CTACGACGGC CGCGAAGCCT TTGATGGCGA CGGTTTCCAG
CTCCACATTG GTCATAACAA GCCGAAGAGC CGGGGTTTTG TGCATGTGCA GTCTGCCGAC
CCCAAACAGG CCCCGCGCAT CCGTTTCAAC TACCTGGAAC ACGAGGCCGA CCGCGAAGGC
TTCCGCGACT GCGTGCGCCT GACCCGGGAG ATCATCAACC AGCCGGCCAT GGACGAGTAC
CGCGGAGCAG AAATCCAGCC CGGTGTGGAT GTGCAGAGCG ATGAGCAGAT CGATGCCTTC
GTGCGCCAGG CGGTGGAGAG CGCTTATCAC CCGTCCTGTT CCTGCAAGAT GGGCACTGAT
GCGCTGGCGG TGGTAGACCC GGAAACCCGC GTGCGCGGTA TCCAGAATCT GCGGGTGGTG
GATTCGTCCA TCTTCCCGAC CATACCCAAT GGCAACCTGA ACGCGCCCAC CATCATGGTG
GCCGAGCGGG CAGCCGACCT TATCCGGGGC AGGGAGCCCC TGCAACCTTC GGACGCGCCG
GTCTTCATGG ATGACCAATG GCAGGCGCGC CAACGTCCGG GACAAGCGAA ACGGTCGCTG
GCCTAG
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| Protein sequence | MKENQYDYII VGAGSAGCVL ANRLTEDSEN RVLLLETGGS DKSIFIQMPT ALSIPMNTKK
YAWQFETEPE PYLDNRRMHC PRGKVLGGSS SINGMVYVRG HARDFDEWQS EGADGWNYRN
VLPYFKKAET WAFGGDAYRG NSGPLGVNNG NNMRNPLYTA FIRAGVDAGY LETDDYNGAR
QEGFGAMHMT VKNGRRWSTA NAYLRPAMAR PNLTVVTHAL VHKVLLEGKT ATGVRYEQGG
QVHEAKAAKE VILSAGSIGS PHLLQLSGIG KREVLEQAGI EVKHELPGVG ENLQDHLEFY
FQFRCQKPVS LNGKLDWWNK LKIGVRWILR KDGLGATNHF ESCGFIRSKA GVEWPDLQYH
FLPAAMRYDG REAFDGDGFQ LHIGHNKPKS RGFVHVQSAD PKQAPRIRFN YLEHEADREG
FRDCVRLTRE IINQPAMDEY RGAEIQPGVD VQSDEQIDAF VRQAVESAYH PSCSCKMGTD
ALAVVDPETR VRGIQNLRVV DSSIFPTIPN GNLNAPTIMV AERAADLIRG REPLQPSDAP
VFMDDQWQAR QRPGQAKRSL A
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