| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3749 |
|---|
| Symbol | |
|---|
| ID | 4655160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 4158457 |
|---|
| End bp | 4159269 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639813726 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_961005 |
|---|
| Protein GI | 120556654 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGAAT TACCTGAAGT TGAAACCACC CGTCAGGGCA TCGCGCCTCA CTGCGAAGGC
CAGACCATCC AGCGGGTAAT TGTCCGCAAC CCCAGCCTGC GCTGGCCGGT GCCGGCGGAT
CTGGCCGAGC ACCTGGAGGG CAAGACCATC CGTGCCGTGG AGCGCAGGGC GAAATACCTG
TTCCTGCACC TGGAGACTGG TTCCGTGATT GTCCATCTGG GCATGTCGGG CAGTCTCAGA
GTGATCACCG ACGACAGCCC CGCCATGACT CACGATCACG TCGAGCTTGT CCTCGGCAAT
CATCGCCGCC TGCGCTTCAA TGACCCGCGA CGCTTCGGCT GTTGGCTGTG GACTACCGAC
TGGAACCGGC ATCCACTGAT CAGCGCGCTC GGGCCGGAAC CCTTATCCGA AGATTTCAAC
GGCGCCTGGC TTTTTCGCCT GTCCCGGCAG AAACAGACGC CGGTCAAATC CTTCATTATG
GACAATCATG TGGTGGTGGG CGTGGGCAAT ATCTACGCCA ACGAAGCCCT GTTCAAGGCC
GGCATTCACC CGAAACGGAA AGCCGGCCGC ATCAGCCTGG ACCGCTATCA CAAGCTGGCC
GAGGCCATCC GGGAAACCCT CAGCGCAGCC ATACTGATGG GCGGCACCAC TCTGCGGGAC
TTCGTCAACA GCGACGGCAA ACCGGGGTAT TTCGCCCAGT CGCTACTGGT TTATGGCAAG
GCGGGAGCGC CCTGCACCGA ATGCAACACC CCGCTGAAAG AGATCCGCAT GAACAACCGA
TCGACGGTTT ACTGCCCCCG ATGCCAGCGC TGA
|
|---|
| Protein sequence | MPELPEVETT RQGIAPHCEG QTIQRVIVRN PSLRWPVPAD LAEHLEGKTI RAVERRAKYL
FLHLETGSVI VHLGMSGSLR VITDDSPAMT HDHVELVLGN HRRLRFNDPR RFGCWLWTTD
WNRHPLISAL GPEPLSEDFN GAWLFRLSRQ KQTPVKSFIM DNHVVVGVGN IYANEALFKA
GIHPKRKAGR ISLDRYHKLA EAIRETLSAA ILMGGTTLRD FVNSDGKPGY FAQSLLVYGK
AGAPCTECNT PLKEIRMNNR STVYCPRCQR
|
|---|
| |