Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_3555 |
Symbol | |
ID | 4655685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 3927549 |
End bp | 3931298 |
Gene Length | 3750 bp |
Protein Length | 1249 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639813532 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_960811 |
Protein GI | 120556460 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCGA GAGAGCGTCG CAGCAGCCCC CGACAGCCGA TCAAACTTGC CGCTCAGATA GATGCCGGCA GTGGTGAGGC GTGGCCCTGC CAGATTGCAG ATTTCTGTGC CGAAGGCATG TTCATTCGTT ATTCGGGCGA AACTTCAGGC AAAATCGAAC GGGCTTTTGC TCGCGGCGGT GTTACCGAAC TGGTGGTTCG GTTCCGGGGT CTTGAGGGCA ATCGTCGATA CGAGCTTCAT GTCAGCCCGG TGCGGCGTAT TGACGGTGCC ATGGGCGTGC ATTTTACCCG CCCCGATTCC GATGCCTTCA ACGCCATGCT CCAGTTGTGT GGCAGCTCCG GTGATCAGTC CCGGTCATCC CTTCGCGCCC CCAGTGAGCG GGTTCAGTTT GTTCTTCATC AGTGTGCCAA AACGGTTACG CGGTTTATTG AACCACTGAT GGATGCCTGT TTTGTGCAGA CGGTGGATGC CCTGCGTGTT ACAGCCCAGA AAGCCCCCAA TGATCAGCTT GCCAATGAGT TGATGGATGC CTCCGGCCAG ATTCAGGGGC GCCAGCGGGT GCTCTGGCAT TACATGAGCC GCAGTCTGGA ATCGCCCTTA AAACCGGAGC CCAAAGGCGC GCCCGGTTCA GTGTTGTCGG TGGTAGACAA AAACGAGTTT GAGGACTGGC TGGCAATTCG GGTGATGGTT ACCCGTGCTG ATACCCAGTA CCGTGGCGAC CTGCTACAGC TCAAGCTGAG GCTGGACAAG TTAGGTATCG CCAATCGCAC CGGCCATCAT AATCCCCTCG GTCCCGCTCT TGTGTGCGAA GCCTTCCATA ACGCGCTTGC CCAACTGAAA GTCAGCCGGG AGGTTGAAAA GGTCTGCCTG AAGACGTTTG AGCAGACGGT GATCAAACAG CTGGAGCCGC TGTATCGGGA GTTGAACAAT ATCCTGATCC GGCATGGTGT GTTGCCGGAT CTGGACCTGT CCCGTTATCT GAGCGAACAG GCGCCGGCCA GGAAGGAACC GCCGACCGAG GTGCTGAAGC GGGAGCCCGA AACACCTCTG GAAAAGCCGC AGCCTGAGGC GCCGGAAAGC AAACCCGGGC AAACGGCCCG CGGGCTGAAA AACCGGGTAG CTGGAGAGTT CCGGGGGTAT GCCCGCGCAG CCCAGACTGC TTTTGCCACG GTGAGGAATC TGCTGACAAC ACTGCAGGCC AGTCGTGTGG AGAATGGAGA GGCGACGCCA GAGCCGTTTG CGGCCAATGC CCGTCCGCTG TCTCAGGGTG AACTGCACCG GGAATTGCAG GAGCTGCAGC TACGCGCTGC GGCTCCGGAA GAGCCGGCCG TGCCCTTGCG GGACCGGGTG GTTGAAAAGA TACGTGAAAC CGGTGACACC CGGCTCAATG CTGAGCAGCA GGACACTCTG GACGTTGTCG ATCGGTTTTT CCGGAGCGTG GTCGATAGCC CCAAGCTCAG TGACTACGCC CAGAGCCGAA TGCGTCAGCT GGAAGTGCCG GTGCTGAAGG TTGTGATGCG TGATCCCGAA TTCTTTGAGG ACCAGGACAG CCCGGTTCGT GGTGTGATGA ACCGCCTGGC ACAACTGGGC GTTAAGGGTG GCCGGCTGAA CCCGGTGGTG CAGCGCCGGG TGGATGAGCT GATTCACCGC ATTGCTACCG AGTTCGAACA GGATACCGGT GTGTTTGAGC AGACCGTAGG TGAGCTGGAC ACGCTGATTG ACCGGCAGAA CCTCGTGTAT CGCCGCAACG TTGAGCGGGT GACTGCTGCC GCAGAGGGTG CCCAGAAGGT TGCCGAATCC AAAACCGCCG TGGCCAGCGC GCTGGAAAGC AAACTGGCTG GCCGCAAGGT TCCCAGGGCC CTGGTCAGCT TGCTTGACGG CGGCTGGCGG GATTTATTGT CGCTGACCTG GATTCGCCAG GGACCAGACA GTCAGTTATG GCAGGACTAC CTGGCGGTGA TCGATTCGCT GATGGCTTTT GCCGAGGACC CGGACAGCAG CATTAACCTG CCCGAACTGT TACGGCTGAT TCAGGATGGT CTGGCGTCGA TCTCCAGCAA CCATATGCCG TCCTCCCAGA TCCGGGATGA GTTGAAGCAG TTTTTGGTGC GTCGGCCTGA CAAGGCGCCG GAAATGGTTG AAATGCCTGC GGTCAGTGGT GTCCGCCCGG ACAAACAGGT GCTCAGTGAG CGGGAACAAC GCAGCCTGCA ACGCTGGATC AACCGGGCCC AGCAATTGCG CACCGGTGAC TGGCTGCGGG ATCAAACCAA GGCGGAAGAT CCCCAGTATA TCCGCCTGGT GTGGATTGCC CGTGGTTTCA GCCGGTTTGT ATTCGTTAAT CACCAGGGTA TGCGGGTGGT TGAGCTGGAG CTGGAAGCTC TGGCCAGACA AATGCGCAAA GGCATCATCG TACCGGATAA TCAGTATGAT CGACCGCTGG TAGATGAGAG CATCGACCGC ATGGTTCGCA ACGTCTATGA CCAGCTGTCC TGGGCATCCA CCCATGATGA ACTGACCCGG CTGCTTAACC GTCGGGAATT CGAGCGTATG CTGGAACAGC AACTTGCCCG CCGGGAAGAT AGCCGGACTT TATTGCAACT GGATCTGCGC GGGTTCCGAT TGCTGAATGA TACGGCGGGC TACCAGGCCG GAGATGAAAC CCTGAAACGG GTGGCGGAGG TCATCTGTCG GCATGTGGGC GATGGCATGC CGGTGGCTCG TCCCGGAGGC AATGAATTTG CCATGCTGGT GCCTGAAGAA CAGGGGCCGG AAATTGCCAA GGCGCTCCTG GAAGCCATTG CAGATGAGCC CTTCGAGTAT GGCGGACGGT GTTACACGTT AAATGCCAAT GTTGGTCTGG CGCCGGAACT GCCCGCGTTG ATCAGCGCCG AAAAATGGCT GAAAGCCGCC GAACAGGCGC TCAATTCTGC CCGTGACAAG GGCCCTGGCC GTTTCTCTAT ATACACTCTC GACGCAGACG ACCAGGCCCG GCAAGAGCAG ATTGCAGCCC GTGTGGCTGG CCTGAGCAAC CCGGATGAAG AACGCATGCT GCTGCGTTGC CAGAAGATCA TCCCTCTGCA CGGCAGCACC CGCATGGGGG CGCAGTATGA AATTCTGATC AGTATGTACG ACGACAGCGG GCAGCTGATT ACCGGCCAGG ATTTCGTCCG CATGGCCGAG CGCTATGACC GTATGCAGGC GGTGGATCGC TGGGTCGTGG GGCACATGCT GGATTGGCTA AGGGATCAGT CACCGGATCC GCGCCATGTA GGCGGTGTCT GCATAAATCT GTCCGGCTAT TCGTTGAACG ACCAGTCACT GCTGGAATTC ATTTACGAAA AGCTCAGTGA GAAGGATGCG CCTATTGAGC GTCTCTGGTT CGAGCTGACG GAAGCCTCTG CCATTCATGA TCTGCAATCG GTGGCGGATT TCATGCTGGA AATGAAAGAG CTCGGCTGCC GGTTCTGCCT GGGTAACTTT GGCAGCGGCC CCAGTTCCTT CCAGTTCATG CGATCGTTGC CGGTAGATCT GATCAAGATC GACAGTGCCT TTACCGGTCA GTTGGCAGCC AACCAGACGG ACCAGGCGAT GGTCAGGTCC ATGGTTGATA TGGCTCACTA CATGGAACGG GAAGTGATTG CCTCTCAGGT TGAATCCCGT GAGGTTCTGG ATATGCTGAG ACAACTGGGC GTGGATTACG CTCAAGGGTT TGTGGTCGAG AAGCCCCGAC TGCTGACCAG CCTTGTCTGA
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Protein sequence | MDPRERRSSP RQPIKLAAQI DAGSGEAWPC QIADFCAEGM FIRYSGETSG KIERAFARGG VTELVVRFRG LEGNRRYELH VSPVRRIDGA MGVHFTRPDS DAFNAMLQLC GSSGDQSRSS LRAPSERVQF VLHQCAKTVT RFIEPLMDAC FVQTVDALRV TAQKAPNDQL ANELMDASGQ IQGRQRVLWH YMSRSLESPL KPEPKGAPGS VLSVVDKNEF EDWLAIRVMV TRADTQYRGD LLQLKLRLDK LGIANRTGHH NPLGPALVCE AFHNALAQLK VSREVEKVCL KTFEQTVIKQ LEPLYRELNN ILIRHGVLPD LDLSRYLSEQ APARKEPPTE VLKREPETPL EKPQPEAPES KPGQTARGLK NRVAGEFRGY ARAAQTAFAT VRNLLTTLQA SRVENGEATP EPFAANARPL SQGELHRELQ ELQLRAAAPE EPAVPLRDRV VEKIRETGDT RLNAEQQDTL DVVDRFFRSV VDSPKLSDYA QSRMRQLEVP VLKVVMRDPE FFEDQDSPVR GVMNRLAQLG VKGGRLNPVV QRRVDELIHR IATEFEQDTG VFEQTVGELD TLIDRQNLVY RRNVERVTAA AEGAQKVAES KTAVASALES KLAGRKVPRA LVSLLDGGWR DLLSLTWIRQ GPDSQLWQDY LAVIDSLMAF AEDPDSSINL PELLRLIQDG LASISSNHMP SSQIRDELKQ FLVRRPDKAP EMVEMPAVSG VRPDKQVLSE REQRSLQRWI NRAQQLRTGD WLRDQTKAED PQYIRLVWIA RGFSRFVFVN HQGMRVVELE LEALARQMRK GIIVPDNQYD RPLVDESIDR MVRNVYDQLS WASTHDELTR LLNRREFERM LEQQLARRED SRTLLQLDLR GFRLLNDTAG YQAGDETLKR VAEVICRHVG DGMPVARPGG NEFAMLVPEE QGPEIAKALL EAIADEPFEY GGRCYTLNAN VGLAPELPAL ISAEKWLKAA EQALNSARDK GPGRFSIYTL DADDQARQEQ IAARVAGLSN PDEERMLLRC QKIIPLHGST RMGAQYEILI SMYDDSGQLI TGQDFVRMAE RYDRMQAVDR WVVGHMLDWL RDQSPDPRHV GGVCINLSGY SLNDQSLLEF IYEKLSEKDA PIERLWFELT EASAIHDLQS VADFMLEMKE LGCRFCLGNF GSGPSSFQFM RSLPVDLIKI DSAFTGQLAA NQTDQAMVRS MVDMAHYMER EVIASQVESR EVLDMLRQLG VDYAQGFVVE KPRLLTSLV
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