| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2894 |
|---|
| Symbol | |
|---|
| ID | 4655068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 3233700 |
|---|
| End bp | 3235382 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639812874 |
|---|
| Product | peptidoglycan binding domain-containing protein |
|---|
| Protein accession | YP_960155 |
|---|
| Protein GI | 120555804 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0428751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAG CTCGTTACCC ACTCACCCTG TACTGCCTTC TCCTGGCTCT GGTGTTTGCG
GTTCCGGCCA GGGCCCAGGG CAATGATGGA CTGATCAACC GCATTGAAGC CCTGCAGGCT
GGTTACCCGG TATCGGTGCT GGAATCCCGG CTATATGCCA AGGAAGCACT GACGCGATTC
TACGAAGCCA GAGGGTACAC GCTGGCCTGG GAGGACCCGA GCAATCGCAG GGAATTGCTC
GAAGCCATCC GGGCAGTGGC CGGTGACGGT CTCAACCCCC GCGACTACCA CTACGACACC
CTTGCAGCAC TCGCCCTGAA AGACCTGAAT GACAGCGCCG AGGAATTACA GACCGACCTT
GACCTTGTAC TCTCGGATGC CTTCCTGCTA CTGGCGTCCC ACCTGCACCA CGGCAAGGTC
AACCCCACAA CCATCCATGC GGAATGGACC GCCAACCGCC AGCAAAGGGA GATGCAGTCG
GTCTTGTCCG AAGCCCTGGC CAGCGGCACC GTCTACACCA CTCTGCAGGA TCTCAAACCC
CGCTCTGCGG CCTACCATCA ACTGGTACAA CGACGCAAAG CGCTGGGTGA GCTGATCAGC
GCAGACTGGC CGGCTATCGT TTCGGGACCA AGTATCCGAC CAGGCGATAC CGACAACCGC
ATACCCGACA TTCGTCGCCG CCTGGCACTG TTGGGCGACC TCTCCGGCGA CTCACCAGAA
GCCTCGAATC ACCAACACTA CGACGACGCC CTGGCCACTG CGATCCCGTT ATTCCAGGCC
CGACACGGCC TGGAACCAGA TGGAATCGTC GGCCGGGACA CTCTGACAGC GCTGAACCTG
TTGCCCCTGG AACGGATATA CCGCCTGGAC GCAAACCTGG AACGGTGGCG GTGGTTACCG
GAATCCCTGG GAGAAACCTA TGTCGTCGTT AACATCGCCG GTTTTGAGCT GGTGCTCGTA
GAGAGCGGCG AGCAGGTCCA TCGCCAACGG GTAATTGTTG GCAGGCCATA CCGGCAGACG
CCAGTATTCA GCGATCGCAT TCGCTACCTG GTTTTCAATC CGACCTGGAC GGTACCCCGG
AAGCTGATGA TCGAAGACCA GCTACCGATC ATACGGTCAG ATCCGGAGTA TCTGGAGCGC
CTGGGCTTCA AGGTTTTCAG GGGCTGGGGC GCAAACCAGA GCGAAGTCGA TCCAGCAGAA
ATCGACTGGA CGGAACTCTC GAAGAACAAC TTTCCCTACC AGCTGATTCA GCAGCCCGGC
CCCCAGAATG CGCTGGGCCA GGTCAAATTC ATGTTCCCGA ACCAGTACGA TATCTACCTC
CACGATACCC CGGCGCAATC GTTGTTCAGT CGGCTGGAGC GAACCCTGAG CTCCGGCTGC
ATCCGTCTGG AACGCCCCTT TGAGCTGGCC GAACGATTGC TGGCAAACAC CAACGGATGG
AACAAAAAGC GAATTGAGCA GACCTTGGCA ACCGCCGAAC CGGCAACCGT AGTGCTATCG
GAACCGGTGC CTGTGTACCT GCAATACTGG ACCACCTGGA TTGATCCGGC CGGCGTTCTC
CAGTTCCGGA ACGATGTGTA TGATCGTGAC CGCCGTTTGC TGCAGGCACT GCGTGCAGAT
TCTGAGGGCG GACAGTCACT TACACCCAGA GCTGATAATC GTCCCACGGC ACGCACGGAC
TAG
|
|---|
| Protein sequence | MQEARYPLTL YCLLLALVFA VPARAQGNDG LINRIEALQA GYPVSVLESR LYAKEALTRF
YEARGYTLAW EDPSNRRELL EAIRAVAGDG LNPRDYHYDT LAALALKDLN DSAEELQTDL
DLVLSDAFLL LASHLHHGKV NPTTIHAEWT ANRQQREMQS VLSEALASGT VYTTLQDLKP
RSAAYHQLVQ RRKALGELIS ADWPAIVSGP SIRPGDTDNR IPDIRRRLAL LGDLSGDSPE
ASNHQHYDDA LATAIPLFQA RHGLEPDGIV GRDTLTALNL LPLERIYRLD ANLERWRWLP
ESLGETYVVV NIAGFELVLV ESGEQVHRQR VIVGRPYRQT PVFSDRIRYL VFNPTWTVPR
KLMIEDQLPI IRSDPEYLER LGFKVFRGWG ANQSEVDPAE IDWTELSKNN FPYQLIQQPG
PQNALGQVKF MFPNQYDIYL HDTPAQSLFS RLERTLSSGC IRLERPFELA ERLLANTNGW
NKKRIEQTLA TAEPATVVLS EPVPVYLQYW TTWIDPAGVL QFRNDVYDRD RRLLQALRAD
SEGGQSLTPR ADNRPTARTD
|
|---|
| |