| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2715 |
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| Symbol | |
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| ID | 4655413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 3038091 |
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| End bp | 3039626 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639812696 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_959977 |
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| Protein GI | 120555626 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATGA AAGCCTCATT ACAGCTTAAG CTGGGCCAGA GTCTGACCAT GACGCCCCAG
CTGCAGCAGG CCATACGCCT GCTACAGCTT TCTACCCTCG ATCTCCAGCA GGAAATCCAG
CAGGCGCTGG AGTCCAACCC CATGCTGGAA ACCTCAGAGG ACGATGAGCA CCCTGAAGGC
GACGAGCGCG AAGAGCACGA GCACAGTGAA GCTTCCAGCT CTGAGGCCAA CCAGGACGAC
AGCCACCAGG ACGCGAGCCC GGACTGGGAC GAAACCGAGA ACGGCCCGGA CTGGTCGTCC
GAGAACGATA TTCCGGACAA CATTCCCGAT GATCTGCCAG TGGATACCGC CTGGGACGAC
ATCTACCAGT CTGCCCCGGC TCCGGCCAGC AAAGGCGAAG ACGAGCACGA ATCGGATTTC
GAAACCCGGA ACTCGCCTAC CGAAACCCTG CAGGATCACC TTGAGTGGCA GCTGAACCTG
ACGCCTCTGA GCGAGCGGGA TCAGGCCATT GCCCACGCGC TGCTGGATGC TGTGGATGAG
CGCGGCTACC TGACGTCTGA CATTGAGGAC ATTCACGCAG GCCTGCTGGA CGAAACCGAA
GAAGACCCGT TGGAACTGGA CGAAGTGGAA GCGGTACTCC ACCGCCTGCA ACACTTCGAC
CCGCCAGGCG TGTTCGCTCG GGATCTCCAG GAATGCCTGC TGATTCAGCT CAACCAGCTG
CCACCGGATA CCCCCTGGCT GCGCCAGGCG AGACTGGTGG TTACCCAGTT CCTGCATCTG
CTTGGCAACC GGGACTACGC ACAGCTGTTG CGCCGCAGCC GGCTCAAGGA AGACCAGCTG
AAACAGGTAC TGGCCCTGAT CACGAGCCTG AACCCGCGCC CTGGCGATGT CGTGGACCGG
GCCGAACCGG ATTACGTTAT CCCGGACGTT ATCGTACGCA AACACGAAGG CCGATGGCGG
GTTGAACTCA ACCCGGAAAT CGCTCCGCGT ATCCGGGTGA ATGCCAGCTA CGCGTCACTG
ATCCGCCGGG CTGACAGCAG TGCCGATAAC ACCTACCTGC GCGACCAGCT GCAAGAAGCG
AAATGGTTTA TCAAGAGCCT GCAAAGCCGG AATGAAACCC TGCTGAAAGT GGCCACCCGC
ATCGTTGAAC ACCAGCAAGG GTTCCTGGAT CAGGGGGAAG AAGCAATGAA GCCTCTGATC
CTGTCTGACA TTGCCCAGGC GGTGGAAATG CACGAGTCCA CGATTTCCCG GGTTACCACC
CAGAAGTACA TGCACACGCC CCGCGGTATT TTCGAGCTGA AGTACTTTTT CTCCAGCCAC
GTCAGCACCG CCGAGGGCGG CGAATGCTCT TCTACAGCCA TCCGGGCGAT GATCAAGAAG
CTGATTGCCG AGGAAACCCC GAAAAAGCCA TTGAGCGATA GCAAAATTGC AGCCATGCTA
GGGGAACAGG GAATCAACGT GGCGCGGCGT ACCGTGGCCA AATACCGGGA GGCGATGCAT
ATCCCTCCCT CGAACGAACG AAAACGCCTG GTTTAA
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| Protein sequence | MVMKASLQLK LGQSLTMTPQ LQQAIRLLQL STLDLQQEIQ QALESNPMLE TSEDDEHPEG
DEREEHEHSE ASSSEANQDD SHQDASPDWD ETENGPDWSS ENDIPDNIPD DLPVDTAWDD
IYQSAPAPAS KGEDEHESDF ETRNSPTETL QDHLEWQLNL TPLSERDQAI AHALLDAVDE
RGYLTSDIED IHAGLLDETE EDPLELDEVE AVLHRLQHFD PPGVFARDLQ ECLLIQLNQL
PPDTPWLRQA RLVVTQFLHL LGNRDYAQLL RRSRLKEDQL KQVLALITSL NPRPGDVVDR
AEPDYVIPDV IVRKHEGRWR VELNPEIAPR IRVNASYASL IRRADSSADN TYLRDQLQEA
KWFIKSLQSR NETLLKVATR IVEHQQGFLD QGEEAMKPLI LSDIAQAVEM HESTISRVTT
QKYMHTPRGI FELKYFFSSH VSTAEGGECS STAIRAMIKK LIAEETPKKP LSDSKIAAML
GEQGINVARR TVAKYREAMH IPPSNERKRL V
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