Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_2580 |
Symbol | |
ID | 4655745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 2897429 |
End bp | 2899165 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639812561 |
Product | alpha amylase, catalytic region |
Protein accession | YP_959842 |
Protein GI | 120555491 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.008896 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGC CACTGAAGAG CAAGCTGCAA GGTATGCTCG AGGTCGTCTA TCCCTCGGTA GATTGCGACT TTCTGGCGGA GCAGTTACTG GCCACCATGG GGCTGGCGCC CAATGCCGAC GCCCCACCGG CCCACCAGAA CCATTGGGAC GAAACTGATG TGTTGCTGAT TACCTACGCG GACACGCTTC AGCAACCGGA CGAGAAGCCG CTGGTGACGC TCAAGCGCTT CCTGGATGAG TGCCTTAAGG ACTCCGTTTC CGCGGTACAC ATACTGCCGT TTTTTCCCTT CAGCTCTGAT GATGGCTTTT CGGTGATGGA TTACCTGGCG GTGAATGAGA GTCACGGTGG CTGGCCGGAA ATTGAGGCCA TTGCCCGGGA CTACAAGTTG ATGTCCGATC TTGTGATCAA CCACATGTCG GCCCGCAGCC GGTGGTTCGA CAACTATAAG AAGCGCATCG ACCCGGGTAA GGACTATTTC TTTGAAGGCA ACCCGAAAGA CGACCTCAGC CAGGTAGTGA GGCCACGTAC GTCGCCCCTG CTCAATCCGG TGCAGACCGA CGACGGCGAG CGCTATGTGT GGTGCACCTT CAGTGAAGAT CAGGTAGACC TGAACTTTGC CAACCCGCAG GTACTGTTGG AGTTTGCGGG GATCATCCGC CAATACCTGG AACGGGGTGT GATGATTTTC CGTATGGATG CCGTGGCCTT TCTCTGGAAA GAGCCGGGCA CGCCGTGTAT TCACCTGCAG CAAACCCACG AGCTGATCAA GATTCTGCGC TTGCTGATTG AACATCACAC GCCGGACGCG GTGGTGATTA CCGAAACCAA CGTGCCCAAC CGGGAGAACC TGACTTATTT TGGCAATGCC AACGAAGCCC ATGCCATCTA TAACTTTTCG TTGCCGCCCC TGCTGATCAA CACGCTGGTG ACCGGCAATT GCCGACATCT GAAAACCTGG CTGATGAGTA TGCCCCCGGC GCAGCTGGGC ACCACCTATC TGAACTTTAT CGCTTCCCAC GACGGCGTTG GTCTGCGGCC CACAGATGGC CTGCTGACCG AAGATGAAAA GCAACGCCTG ATCAACACCA TGGAGTCGTT TGGGGGTAAG GTGTCCTACC GCCGGACGGC CGACGGGCGG GATCAGCCCT ATGAGATGAA TATTGCGCTC TGGGATGCGC TCAAAGGAAC CACAGAAGGC GGTGCTGACC ACTGGCAGCT CGCACGATTC CTGTGTGCGC ATACCATTAT GCTGGCCCTC GAGGGCATTC CCGCCTTTTA TATTCACAGC TTGCTGGCCA CGGAGAACGA TCAGGCGCGG GTGGAGCATA CCGGGCGCCT GCGCTCCATT AACCGCAGTC AATGGCAGTT GTCGCAACTG GAGGAAACCC TCGCAGATCC ACTGACCCAC CACAGCAAGG CATTCCGGGA GCTGAAGCGC TTGATTGCCA TACGCCGTGC TCAACCTGCT TTCCATCCGA ACGCCACGCA GTTCACCTTA CACCTGGGGT TGCAGTTGTT CGGGTTCTGG CGCCAGAGCA TGCGCCGGGA GCAGTCGGTG TTCTGTATCC ATAACATCAG TCCCGAGGTG CAGCAGGTGG CGCTCAGTGA TATTAATCTG ATTGGAACGG ATCGTTGGGT AGACTTGATC TCCGGAATGG AGGTGGATGA TCTGGCTGGG TCAATCACCC TGAAGCCGTA TCAGAGTGTG TGGTTGTCCA ACCAGCAGAG ACGCTGA
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Protein sequence | MTQPLKSKLQ GMLEVVYPSV DCDFLAEQLL ATMGLAPNAD APPAHQNHWD ETDVLLITYA DTLQQPDEKP LVTLKRFLDE CLKDSVSAVH ILPFFPFSSD DGFSVMDYLA VNESHGGWPE IEAIARDYKL MSDLVINHMS ARSRWFDNYK KRIDPGKDYF FEGNPKDDLS QVVRPRTSPL LNPVQTDDGE RYVWCTFSED QVDLNFANPQ VLLEFAGIIR QYLERGVMIF RMDAVAFLWK EPGTPCIHLQ QTHELIKILR LLIEHHTPDA VVITETNVPN RENLTYFGNA NEAHAIYNFS LPPLLINTLV TGNCRHLKTW LMSMPPAQLG TTYLNFIASH DGVGLRPTDG LLTEDEKQRL INTMESFGGK VSYRRTADGR DQPYEMNIAL WDALKGTTEG GADHWQLARF LCAHTIMLAL EGIPAFYIHS LLATENDQAR VEHTGRLRSI NRSQWQLSQL EETLADPLTH HSKAFRELKR LIAIRRAQPA FHPNATQFTL HLGLQLFGFW RQSMRREQSV FCIHNISPEV QQVALSDINL IGTDRWVDLI SGMEVDDLAG SITLKPYQSV WLSNQQRR
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