| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2276 |
|---|
| Symbol | |
|---|
| ID | 4653863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2549851 |
|---|
| End bp | 2550756 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639812250 |
|---|
| Product | tyrosine recombinase XerD |
|---|
| Protein accession | YP_959541 |
|---|
| Protein GI | 120555190 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.235275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAGGC CAGAAGATGA GCAGTTGATA GAGCGTTTCA GTGACGCGGT CTGGCTTGAG
GATGGCCTTG GCGAGAAAAC CCGGCAGGCC TATGCCAGTG ATCTGTACCG TTTGTCCGGG
TGGCTGGAGC AGCAAGCTGG GGCGCCAACC CTGCGCAGCG CACGACGCAC AGACCTTTTG
GCCTGGATGT CCCGGGGCTT GTCCGACGGC CTGAAAACCA GCACGGCGGC CCGCCGCCTG
TCTGGCGTAA GGCGCTTTTA TCGTTTTCTG TTGCGTGAAG GCATTATTGC CGAAGACCCA
ACGTTGCGGA TTGACAGCCC TAGGTTGCCC AGACGCTTGC CGGATACCCT GACCGAGGCC
GACGTGGAGT CGCTGCTGAC TGAGCCGGAC CCGGAGCTGC CAGTAGAATT GCGGGATCGG
GCCATGCTGG AGATTCTCTA TGGCTGCGGA CTTCGGGTTT CGGAGTTGAC GGGGCTGACG
GTGGACCAGG TCAACCTGAG GCAGGGCGTG GTTCGCATTC AGGGCAAGGG CGGCAAGGAG
CGTTTGGTGC CGCTGGGTGA GGAAGCTGTG GACTGGTTAT TACAGTATAT GCGGCAGGCC
CGGGGCGAGC TGCTGCGAGG CAAAACCAGT GATGCCCTGT TTCCGGGTAA TCGTGGCACC
GCCATGACCC GGCAGGCCTT CTGGTATCGA ATCCGGCATT ATGCGATTCG CTGCGGAATC
ACCAAGCACC TTTCTCCTCA TACGCTCAGG CATGCATTTG CCACCCATTT GCTTAATCAC
GGGGCGGATC TTCGGGTGGT GCAGATGCTG TTGGGGCATT CAGATCTGTC GACCACCCAG
ATCTACACTC ATGTTGCGCG CCAAAGATTG CAGGATCTTC ATCAGGCCCA TCACCCCAGG
GGTTGA
|
|---|
| Protein sequence | MPRPEDEQLI ERFSDAVWLE DGLGEKTRQA YASDLYRLSG WLEQQAGAPT LRSARRTDLL
AWMSRGLSDG LKTSTAARRL SGVRRFYRFL LREGIIAEDP TLRIDSPRLP RRLPDTLTEA
DVESLLTEPD PELPVELRDR AMLEILYGCG LRVSELTGLT VDQVNLRQGV VRIQGKGGKE
RLVPLGEEAV DWLLQYMRQA RGELLRGKTS DALFPGNRGT AMTRQAFWYR IRHYAIRCGI
TKHLSPHTLR HAFATHLLNH GADLRVVQML LGHSDLSTTQ IYTHVARQRL QDLHQAHHPR
G
|
|---|
| |