| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2239 |
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| Symbol | rumA |
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| ID | 4654879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2508856 |
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| End bp | 2510205 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639812214 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_959505 |
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| Protein GI | 120555154 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGC GTCGCCGCAA GGTTCTGCCC AAGGAGCCTG TGCGTTGTGA AATCGAGACC
CTGAGCCACG ATGGCAGGGG CATTGCCCGC GCTGATGGCA AAACCCAGTT TGTTGACGGA
GCCCTGCCGG GCGAAACCGT GATGGCCAAA ATGGTCAGGA CCCGCAGCCG GTTTGATGAA
CTGCGCACAA CCGAAGTGCT GGAAGCAGCG CCTGACCGCC AGCAGCCGCC CTGTGAGTTT
GCCGATCTTT GCGGTGGTTG CAGTCTTCAG CACATGAGCG CCGATGCCCA GATCCGGTTC
AAGGAAAATA CCCTGCGCGA GCATTTTGCC CACTTTGGGG GCATTGAACC GGAGCAATGG
GTGGCTCCGA TGCGTTCTCC GGATAGCCTC GGCTACCGTC GCAAGGCGCG GCTGGGCGTA
CGTTATGTGA AGGCCCGGGA GTCGGTGCTG GTTGGTTTCC GGGAGAAACG CAACAGCTTT
CTGACCGATA TCGACCGCTG CGTGGTGCTG GATCCCCGGA TCGGTGAGCG AATCGAGCCC
CTTCGGGAGT TGCTGCATGG CATGGCGGCA TTTGACCGGA TTGCCCAGGT GGAAGTGGCC
TGTGGCGATG ATACGGCTGC CATGGTGTTC CGTAACATGG ATGACCTGGT GCCGGACGAC
CGGGAAAAGC TGATCGCCTT TGGTCAGGCC CATGACTTGC ATATCTATCT GCAGCCCAAG
GGCCCGGACA CCGTGCACCG GATCTGGCCG GAATCCGGCG GGCGGGACGA TGAGCGTCTG
ACCTATCGTA TGGATGAGTT TGACCTCACC ATGGCCTTTC ATCCTATGGA CTTCACCCAG
GTGAACGCCG GTATCAACCG CAATATGGTG CACCGTGCGG TCGAGTGGCT GGACGTCCAG
CCGGGTGAGC GGGTGCTGGA TCTGTTCTGT GGTCTGGGCA ATTTTACGCT GCCACTGGCC
CGCAAGGGCG GTCAGGTTGT GGGTGTGGAA GGTGACGATG CCATGGTGGT TCGTGGCCGT
GAAAATGCCC GCTTGAACGA TCTCTCCAAT GTGGAATTCC ATGGTGCCGA TCTGCACGGG
GATTTCACCG GGCAATCCTG GGCAAAAGAG GGGTTTGACA AGATTCTGAT CGATCCGCCA
CGTTCAGGCG CGGAGGAGAT CTGTAAGTAT CTGACCGCTT TCGGTGCCAA CCGCATTGTT
TACGTGTCCT GCAACCCCGC TACCCTGGCG CGGGATGCCG GGGTGATGGT GCGCAACGGT
TATCGGCTGG TACAGGCCGG TGTGATGGAT ATGTTTCCCC ATACCACCCA CGTTGAGTCC
ATTGCGTTGT TTGAGCGTAG CGCAGACTGA
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| Protein sequence | MSKRRRKVLP KEPVRCEIET LSHDGRGIAR ADGKTQFVDG ALPGETVMAK MVRTRSRFDE
LRTTEVLEAA PDRQQPPCEF ADLCGGCSLQ HMSADAQIRF KENTLREHFA HFGGIEPEQW
VAPMRSPDSL GYRRKARLGV RYVKARESVL VGFREKRNSF LTDIDRCVVL DPRIGERIEP
LRELLHGMAA FDRIAQVEVA CGDDTAAMVF RNMDDLVPDD REKLIAFGQA HDLHIYLQPK
GPDTVHRIWP ESGGRDDERL TYRMDEFDLT MAFHPMDFTQ VNAGINRNMV HRAVEWLDVQ
PGERVLDLFC GLGNFTLPLA RKGGQVVGVE GDDAMVVRGR ENARLNDLSN VEFHGADLHG
DFTGQSWAKE GFDKILIDPP RSGAEEICKY LTAFGANRIV YVSCNPATLA RDAGVMVRNG
YRLVQAGVMD MFPHTTHVES IALFERSAD
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