| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1997 |
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| Symbol | fliF |
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| ID | 4654380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2223884 |
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| End bp | 2225590 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639811968 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_959265 |
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| Protein GI | 120554914 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.27739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCG TACCTGCGGA AACCGCCGCC TCTGACCTGC CGGCTACTCA GGAGTCTGAT
ACTCCGGAGA GCCGTAGCAA TCTTTTGCTC GGATTCAACC GATTGAATCT GCTGCGCCAG
GTCGGGCTTA TGGTCGGGCT GGCCGCCAGC GTGGCACTGG GTGTGGCTGT GGTGCTCTGG
GCCCAGGAGC CCAATTACCA GCCGGTGGTG GGGGATCTGT CTGCCTACAA CCCGCAGGAC
GTGACCACCA TCCTCGACAG CAACGGTATC GATTACAAGA TGGACCCCCG CACCGGAGCA
TTGCTGGTGC CGTCTGAACA GGTCTATAGC GCGCGCCTCA AGCTTGCTGC TGAAGGCGTA
ACCGACCAGA AGACCATGGG TTATGAGTTG CTGGACCAGG AACGTGGTCT GGGAACGTCC
CAGTTCATGG AAACCATCAG CTACCGGCGC GGACTGGAGG GCGAACTGGC CCGGACCATC
GCCGCCATGC GTGGTGTTCG AAATGCCCGG GTGCACCTGG CCATTCCCGA GCGTTCGGTG
TTTATCCGGG ATGCCCGTGA ACCGACCGCC TCGGTATTCC TTGAAGTGTT TGCGGGCCGT
CGCCCTGAGC CTGAACAGAT TCGGGCCATC GTCAACCTGG TGGCCGGCAG CATTCCGATG
ATGAACCGGG ATCAGGTGAC CGTGGTTGAC CAGAACGGCA ATCTGTTGAC GGGCGATGAG
GTTCAGGCCG AAACAGACCG GATGAAAGAC CAGTATGAAT ACACGTCCAG GGTTGAAGAG
CGGCTGACCC GCCGTGTCGC CTCATTGATT GGCCCGATTG TCGGGGAAGG GCGTTACCGC
GCGGAAGTCA CCGCCGACCT CGACTTCTCT GCGGTCGAGC GTGCCGAGGA GTTATACAAT
CCGGAGCAAC AGGCGGTGCG CAGTGAGCGC GAGTTGTCTG AGCAGCGTGT GGCGGGAGCC
CAGGGTGGCA TTCCCGGTGC GCTGGCCAAT CAGCCGCCAG GGGCTGCGAC GGTTCCGGAG
CAGGCCACTG CCGCCCCAGG GGAAGATGGC GCTCCTGCAG CTCCGCCGGT GAATGTCCGG
AGTGAATCCA CCCGGAACTA TGAACTGGAT CGTACCGTCA GCTACACCCG TCAGGAGCTG
GGTGCGGTCA AGCGGGTGAC CGTGGCCCTT GCCGTGGATG ACATGAAAGT GGTCGACCCG
GAAACCGGCG AGGTGAGCTA TCAACCCTGG CCAGAGGCCG AACTGCAACG GCTGAGCATG
CTGGTGCGTG ATGCGGTTGG CTATTCCGCG TCCCGCGGAG ACAGCGTTAC CGTCATGAAT
ACGGCGTTTG CCCCAGAGGA AGCGGTGGAG TTTGAAGCTC CGGGCTTCTG GGAGCAGCCC
TGGTTCTGGG ATTTGATGAA GCAGGTATTG GCAGGACTGG TCATTCTGAT TCTGGTTCTT
GGCTTGCTGC GCCCCACCCT GAAGACGCTG TCCGGTGGCG GCCGCCGCGA GCGTGGTGAA
GGCGGAGAAG AGGGGGAGTA TGGTGGCCTT GCTGATATCG AAGGCGGGCA GGCACTACGC
GATGCCATGT CGTCTCAGGA TGACCTGCTT TTGCCGGGCG CCACAGACAG CTATGATAGA
CAGTTGAATG CACTCAAAGG CCTGATTGCG GAAGATCCCG CCAGGGTTGC ACAGGTTATG
CGCCAGTGGG TGAACGTCGA TGACTGA
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| Protein sequence | MASVPAETAA SDLPATQESD TPESRSNLLL GFNRLNLLRQ VGLMVGLAAS VALGVAVVLW
AQEPNYQPVV GDLSAYNPQD VTTILDSNGI DYKMDPRTGA LLVPSEQVYS ARLKLAAEGV
TDQKTMGYEL LDQERGLGTS QFMETISYRR GLEGELARTI AAMRGVRNAR VHLAIPERSV
FIRDAREPTA SVFLEVFAGR RPEPEQIRAI VNLVAGSIPM MNRDQVTVVD QNGNLLTGDE
VQAETDRMKD QYEYTSRVEE RLTRRVASLI GPIVGEGRYR AEVTADLDFS AVERAEELYN
PEQQAVRSER ELSEQRVAGA QGGIPGALAN QPPGAATVPE QATAAPGEDG APAAPPVNVR
SESTRNYELD RTVSYTRQEL GAVKRVTVAL AVDDMKVVDP ETGEVSYQPW PEAELQRLSM
LVRDAVGYSA SRGDSVTVMN TAFAPEEAVE FEAPGFWEQP WFWDLMKQVL AGLVILILVL
GLLRPTLKTL SGGGRRERGE GGEEGEYGGL ADIEGGQALR DAMSSQDDLL LPGATDSYDR
QLNALKGLIA EDPARVAQVM RQWVNVDD
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