| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1952 |
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| Symbol | |
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| ID | 4656486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 2182720 |
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| End bp | 2183994 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639811923 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_959220 |
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| Protein GI | 120554869 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.698376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA CCTTCTGGAT TGCCGGGACC GTACTCATTC TGGTGGCCCT GGCCTTTGTG
CTTTATCCAG TCTTTTTTCA TAAACCCCGG GCCCGCCTGG AGGCGGATCT GAGAAATCAG
AATCTTCTGG CCTACCGCAC CCGGCTCAAA GAGCTGGAGA ACGAGCACGA GGCCGGCATA
CTGGATGACG AGAGCTACAA GCAGCTGAAG GAAGAGCTGG CGGGCGCCAT GCTCGATGAT
GTACCGGAGG AGCCCGTTAC CCAGCGACGA GTACCCGGGC GGCGTAGCGC CATGGTTGTC
GCCTTGCTGG CGATCCTGGT CTTGCCGGTG GGCACCTATT TCGGGTATCA GGAATGGGGT
TCCATGGATC AGGTGGAGCA GTTCCTTGCG ATGCAGGAAA TGAATGCCAC GCAAGGCGAC
CAGACGGCCC GCATGGCGGC ATTGGCCGAC CAACTGCGCA AGCGACTTGA AGAAAGCCCG
GACAATGCCG ATGGGTGGGC GATGTTGGGG CAGACCTACA TGCGTCTTGA GCGCTATGAG
CAAGCGGCCG AGGCCTATCG CCGTCTTGCC GATGTGGTAT CCGAGGACCG AAACGCCAGC
GCGGTGGCCC TGGGGCTGGC TGCACAGGCT AACTATTTTG CCAGCGAAGG CGAGATGACC
CCGGCGGTTA CCGATGCTAT TGCGGCTGCC CGGGCCCTGA ACCCGGATGA GGTCAATGCA
CTTGGGCTGA TGGGCATCAA TGCCTTCGGT CAGCAAAACT ACCGGGAAGC CATTGAATAC
TGGCAGCGTA TTACCGAGGT AGCGCCGGAC CATCCACAGC TCGGGGCCAT CCGTGGCGGT
ATCGAGGAGG CCTACCGACG CCTGGGCGAG ACCCCGCCTG AGGGAGTTGC CTCCGAGCCT
CAGCAGGCTG CTGGACCGGG CGTGTCCTTA CGGGTATCGC TGGACGAAGG TTTGCGCCAG
CAAGTGGCTG ACAATACCGT GTTGTTCATC TTTGCGCGGC CAGCGGCTGC GGCGGGCGGT
GCGCCGGTTG CTGTTGCCAG GATGACAGCC GGCGATTTGC CCGCCGAGAT CCGGCTGGAT
GATCGTTATG CCATGTCCCC TGAATCTGCG ATTTCTGCAC AGCAAGATGT GGTGGTGGTC
GCCCGTTTGA GCCGCTCAGG CAGTGTTAAT CCGCAGCCGG GAGACTGGGA AGGCCGGGTT
GAGGCAGAGG TGCTGCCCCC GGCGGAAGCG GAACCACCTG TCGAGTTGGT GATTAACCAG
GAACTGACCA ACTGA
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| Protein sequence | MTDTFWIAGT VLILVALAFV LYPVFFHKPR ARLEADLRNQ NLLAYRTRLK ELENEHEAGI
LDDESYKQLK EELAGAMLDD VPEEPVTQRR VPGRRSAMVV ALLAILVLPV GTYFGYQEWG
SMDQVEQFLA MQEMNATQGD QTARMAALAD QLRKRLEESP DNADGWAMLG QTYMRLERYE
QAAEAYRRLA DVVSEDRNAS AVALGLAAQA NYFASEGEMT PAVTDAIAAA RALNPDEVNA
LGLMGINAFG QQNYREAIEY WQRITEVAPD HPQLGAIRGG IEEAYRRLGE TPPEGVASEP
QQAAGPGVSL RVSLDEGLRQ QVADNTVLFI FARPAAAAGG APVAVARMTA GDLPAEIRLD
DRYAMSPESA ISAQQDVVVV ARLSRSGSVN PQPGDWEGRV EAEVLPPAEA EPPVELVINQ
ELTN
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