| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1152 |
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| Symbol | sdhA |
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| ID | 4657161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 1309769 |
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| End bp | 1311541 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639811118 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_958430 |
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| Protein GI | 120554079 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACA TCAAGACCAT GTCGTTCGAC GCGATTGTTA TCGGTGGTGG CGGTGCCGGT
ATGCGAGCCG CCCTCCAGCT GACCGAATCC GGTCTCGATA CCGCGTGTAT CACGAAAGTA
TTTCCGACCC GTTCGCACAC GGTATCCGCC CAGGGCGGTA TTACCTGTGC GATCGCAAGT
GCTGATCCCA ACGACGATTG GCGCTGGCAC ATGTACGACA CTGTGAAAGG TTCTGACTAC
ATCGGTGACC AGGACGCGAT TGAGTATATG TGCTCCGTCG GTCCGCAGGC AGTGTTCGAG
CTCGAGCACA TGGGCCTCCC GTTCTCCCGT ACCGAGCAGG GTCGTATCTA TCAGCGTCCG
TTCGGTGGTC AGTCCAAGGA CTACGGTAAG GGCGGTCAGG CTGCCCGTAC CTGTGCCGCA
GCCGACCGTA CCGGTCATGC TCTGCTGCAC ACGCTATACC AGGCTAACCT CAAAGGCGGC
ACTTCGTTCC TGAACGAGTG GTACGCCGTG GACCTGGTCA AGAACAGTAA AGACGAAGTG
GTCGGTGTTG TCGGTATCGA AATTGAGACC GGTGAAGTCT GCTACATCAA GGCCAAGGCG
ACCGTTCTGG CAACCGGTGG CGCCGGTCGT ATCTATGCGT CAACCACCAA TGCCCTGATC
AACACCGGTG ACGGTATCGG TATGGCCCTG CGTGCCGGCT TCCCGGTTCA GGACATGGAA
ATGTGGCAGT TCCACCCGAC CGGTATCCAC GGTGCCGGTG TGCTGGTAAC TGAGGGTTGC
CGGGGTGAGG GTGGTTACCT GATCAACTCC GAAGGTGAGC GTTTCATGGA GCGTTATGCT
CCGAACGCCA AAGACCTCGC TGGTCGCGAC GTTGTTGCCC GCTCCATGGT TCTGGAAATT
CTGGAAGGCC GCGGCTGTGG TCCCGACAAG GATCACGTAC TGCTGAAGCT GGATCACCTG
GGCGAAGAAA CGCTGAACCT GCGTCTGCCG GGTATCTGTG AGCTGTCCCG TACCTTTGCC
CACGTTGATC CGGTCAAAGA GCCGGTGCCA GTGGTTCCGA CCTGTCACTA CATGATGGGC
GGCATTCCGA CCAACGTTGG TGGTCAGGCG CTGACTCAGG ATGAAAACGG CAATGACAAG
CCGATTCCGG GCCTGTTTGC CTGCGGTGAA GCCGCTTGTG TGTCTGTGCA CGGTGCTAAC
CGTCTGGGAG GCAACTCTCT GCTGGATCTG GTGGTCTTTG GTCGTGCGGC TGGCCTGCAC
ATTGAGGAGC AGCTGCGTGG TGGTTTCGAG GTCGACGGCG CAAGCGACGA AGACATCAAG
CGTGCCATGG CTCGTCTGGA GCGTCTGGAC AGTGCAAGTG AGGGTGAGGA TGTGGCTCAG
GTTCGTAAAG ACCTGCAGAA CTGCATGCAG CTCTACTTCG GCGTGTTCCG TGACGGCGAA
AGTATGGAGA AGGGTCTGAA GCTGCTGGAA GAAATCGGTG AGCGGGTTCG TAAGACCAAG
CTGACTGATA CCAGCAAGGC ATTCAACACC GCCCGTATCG AAGCACTGGA GCTGGACAAC
CTGTACGAAG TTGCCTATGC GACCGCCAAG TCTGCGATTG AGCGTAAAGA AAGTCGCGGT
GCCCATGCCC GTAACGATTT CACCGAGCGT GACGACGAGA ACTGGCTGAA GCACTCCATG
TACTTCCCGC TGGACAAGCG CGTTGGCAAG CGTGACGTGA ACTTTGCACC GAAAACGGTT
CCGACCTTCG AGCCGAAGAT CCGGACCTAC TAA
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| Protein sequence | MANIKTMSFD AIVIGGGGAG MRAALQLTES GLDTACITKV FPTRSHTVSA QGGITCAIAS
ADPNDDWRWH MYDTVKGSDY IGDQDAIEYM CSVGPQAVFE LEHMGLPFSR TEQGRIYQRP
FGGQSKDYGK GGQAARTCAA ADRTGHALLH TLYQANLKGG TSFLNEWYAV DLVKNSKDEV
VGVVGIEIET GEVCYIKAKA TVLATGGAGR IYASTTNALI NTGDGIGMAL RAGFPVQDME
MWQFHPTGIH GAGVLVTEGC RGEGGYLINS EGERFMERYA PNAKDLAGRD VVARSMVLEI
LEGRGCGPDK DHVLLKLDHL GEETLNLRLP GICELSRTFA HVDPVKEPVP VVPTCHYMMG
GIPTNVGGQA LTQDENGNDK PIPGLFACGE AACVSVHGAN RLGGNSLLDL VVFGRAAGLH
IEEQLRGGFE VDGASDEDIK RAMARLERLD SASEGEDVAQ VRKDLQNCMQ LYFGVFRDGE
SMEKGLKLLE EIGERVRKTK LTDTSKAFNT ARIEALELDN LYEVAYATAK SAIERKESRG
AHARNDFTER DDENWLKHSM YFPLDKRVGK RDVNFAPKTV PTFEPKIRTY
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