| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1075 |
|---|
| Symbol | |
|---|
| ID | 4656054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 1224811 |
|---|
| End bp | 1226238 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639811039 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_958354 |
|---|
| Protein GI | 120554003 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGT ATCTGCGGCG TGCTGCTGAG GCGGAGCTTG GCTGGCCGCT GCCAGAGGAT
CTGAGTGAAG CCCAGCTGGA GCAACGGCTG TTCCCGCCAC CACCGGATCT GCCGGCACAG
GCCCGAGGCA TTCCGGATTG GAAGCGAATC CACGATGAAC TCCGGGGCAA GAACGTCACC
CTGTTCCTGC TCTGGCAGGA GTACCGGGAA GCCAATCCGG ATGGCTACCA GTACAGCTGG
TTCTGCGAGC ACTACCAGGC CTGGCAGGGC AAGCTGGATC TGGTGATGCG TCAGGACCAC
CGAGCCGGTG AAAAGCTGTT CGTGGACTAT GCTGGGCACA CGGTGCCCGT CATTGACCGC
ACCACCGGTG AGATCCATGA GGCGCAAGTC TTTGTGGCGG TGATGGGTGC GTCCAATTAC
ACCTACGCCG AGGCCACCTG GAGCCAGACC CTGCCGGACT GGATCGGCTC CCACATCCGA
GCCTTCGAGT TCCTGGGCGG CGTGCCGGAA CTGGTGGTTC CGGATAACCT CCGTTCCGGC
GTCAGCAAGG CCCATCGCTA CGAGCCGGAT CTCAATCCGA CCTATCAGGA TATGGCTGGC
CATTATGGCG TGGCCGTTGT CCCTACACGG GTTCGCAAGC CCCGTGACAA GGCCAAGGTG
GAAGGTGGCG TATTGATCGT TGAGCGCTGG ATCCTGGCGG CCCTGCGCCA TCGTCAGCAC
TTCTCCCTGG GGCAGCTCAA CGCCACCATC CGTGAGCTGT TGGAGAAGCT CAATAGCCGC
CCCTTCCGCA AGTTGCCCGG GTGCCGGCTT GATCACTTCA AACAGCTGGA CCAGCCGGTT
CTACAACCGC TACCCGCCGA GCCGTATGTC TACGCCGAGT GGAAAAAAGC CCGGGTACAC
ATCGACTACC ACGTGGCCAT CGATGGGCAC TACTACTCGG TGCCCTACAC CCTGATCAAG
AAAGAGGTGG AGGTCCGGAT CACCCACAAC ACCATCGAAT GCTTCCACCG GGGCAACCGG
ATCGCCAGCC ACCGGCGTTC GGATCAGAAG GGTCGGCATA GCACCATCGC CGCTCACATG
CCGGAGTCCC ATCGCCAAGC CGGCGAGTGG ACCCCAGAGC GACTGACCGC CTGGGCAGCC
AAGACTGGAC CGGCAACTGA AAAGCTTATC CGTACCGCGC TGGGGGCAAG AAAGCATCCG
CAACAGGCCT ATCGGTCCTG TCTGGGCATT CTCCGGCTGG GCCAGAGCTA CGGCGAGGCA
CGATTAGAAC GTGCCTGCCA ACGCGCCCTG ATGCTGGGCA GCTGCCGATA CAAGAGCATC
GAATCCATCC TCAAGCATCG CCTGGATGAG CAGCCCCTGG AAGAGCAACA AGAACTGGCC
TTACCCGACA CACACGACAA CATCCGTGGC CCCGCCTACT ACCACTGA
|
|---|
| Protein sequence | MSEYLRRAAE AELGWPLPED LSEAQLEQRL FPPPPDLPAQ ARGIPDWKRI HDELRGKNVT
LFLLWQEYRE ANPDGYQYSW FCEHYQAWQG KLDLVMRQDH RAGEKLFVDY AGHTVPVIDR
TTGEIHEAQV FVAVMGASNY TYAEATWSQT LPDWIGSHIR AFEFLGGVPE LVVPDNLRSG
VSKAHRYEPD LNPTYQDMAG HYGVAVVPTR VRKPRDKAKV EGGVLIVERW ILAALRHRQH
FSLGQLNATI RELLEKLNSR PFRKLPGCRL DHFKQLDQPV LQPLPAEPYV YAEWKKARVH
IDYHVAIDGH YYSVPYTLIK KEVEVRITHN TIECFHRGNR IASHRRSDQK GRHSTIAAHM
PESHRQAGEW TPERLTAWAA KTGPATEKLI RTALGARKHP QQAYRSCLGI LRLGQSYGEA
RLERACQRAL MLGSCRYKSI ESILKHRLDE QPLEEQQELA LPDTHDNIRG PAYYH
|
|---|
| |