Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0830 |
Symbol | |
ID | 4655110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 941490 |
End bp | 943604 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639810789 |
Product | type IV pilus secretin PilQ |
Protein accession | YP_958114 |
Protein GI | 120553763 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4796] Type II secretory pathway, component HofQ |
TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.629158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAA GAAACATGCA CGAACAAACA GGTTTAGGGT CGAGGCTAGC GATGTTCAAA AAACTCAATG TCTGCGTAGG CGTGATTGCC ATCGGGTTAT GGAGCGGCCT GGCCAGCGCG GTCACGCTGC AGGACTTGTC GTTTTCGTCG CTGCCGGGGG AGCGGCTGGA AGTTACCATG CAGTTTGATG GCACGCCGCC GGAACCTTCG GGCTATACCA TAGAGCGGCC TGCCCGGATT GCGGTGGATC TTAAAGACAC CACCAGCGCC TTGAACCAAC GCAGTATCCC GCTGGGTACC GGTAATGCTC AGAGCGTTAC CGTGGTCGAA ACCAAGGATC GCACCCGGTT GATCTTTAAC CTGGTTGAAT TGGTGCCTCA CGATACCGTG CGTACCAGCA ACTCTCTGGT AATGACCATT GGTGGTGAGT CTGACGCCGT CGCCTCCAAC TCTTCTCAGC CGGCACAGCG TACGACGACG GCTTCTCCTG CATCGTCGAA TGCGTTGGCT GGTGTTGATT TCCGTCGTGG TAAAGAGGGC GAGTGTCGGG TGATCGTCGA TCTGGGTAGC AGCACGGCGA CTGTTAATCT GAACGAGTTG GGTGGCCGTA TCCGCTTGGC CATGCCTGAC CTTAAGGTTC CAGCCGATTT GCGCCGTCGT CTCGATGTAA CTGATTTTGC AACGCCGGTT ACTCGTATAG ACACATTTGT GGAAGACGGA CATGCGGTAG TGGAGATTCG CCCTGAGGGT GATTACGACT ATATTGCGTA TCAATCTGGT AGGGAGTTCA CGGTAAGTGT TGAAGCGCTG AGCCAGGAAG AAGCGGAAAC TCGTCGCGAG GAGAAGTTTC CGTATACCGG TGAGAAGCTG TCCCTGAACT TCCAAGATAT TGAGGTTCGC TCTGTGCTTC AGCTGATTGC TGATTTCACT GGCCTGAACC TGGTTGCCAG TGACACGGTG GGAGGCAGTA TCACTTTGCG TCTGCAGAAT GTGCCCTGGG ACCAGGCCTT GGACCTGATA CTCAAGACCA AAGGTTTGGA TAAGCGTCAG ATCGGCAACG TACTGCTGGT TGCCCCTGCT GAGGAAATTG CGGCCCGTGA AAAGCTTGAG CTTGAAACCA ACAAACAGAT CGCTGAGTTA GCGCCGGTGC GGCTGGATAT TATTCAGGTG AACTACGCCA AGGCGGCGGA TGTGGTAGCT CTGATCCAGG CGGATGAAGA GCTCATCTCC TCCCGGGGTT TTGTGTCTTC TGATGCCAGA ACAAATACCA TCAGTGTTCG CGAAACCGCT GAGAAACTGG AGGAAATTCG CCGGCTGGTA TCCACGTGGG ATGTCCCGGT TCGTCAGGTG TCAATTGAAG CTCGAATTGT CCGTGCACAA ACTAACGTCG CAGAAGATCT TGGTGTTCGT TGGGGAGGCG CGGCTTACAA CGTCGACGGT GATGATGTGA TTACTGTCGG TGGTTCTCTC GGGACACTGC AGGAAGCCAG AGACGCCGCA AGCGGTGGTA GCAACACTAT TTCTTTCCCG GGCGCTCTGG GCGTTGATCT TGGTGTGAGC GGTGATGGGG CTTCTTCATT TGCAATCGGT TGGGGAAGTG ATGACTTCTT GGTAGATCTT GAGCTCTCCG CTCTTGAGAG TGATGGTCGA GCGGAGGTGG TTTCTCAACC TCGGGTTGTT ACTGCTGATC GCCAGACAGC ATCCATCAAG TCTGGTGAAG AAATTCCATA CCAGGAGGCG ACATCTAGTG GTGCAACGAA CATCGAATTC AAGGAAGCGG TGCTTTCTCT CGAGGTGACC CCGCAGATCA CGCCCGATGA CAAGATCATT ATGGATCTCG TGGTCAATCA GGATTCCCGG GGCGAAGTAA CCGCAGGCAT CCCGTCTATC AATACTAACG AAGTGACAAC ACAGGTGTTG GTTGCCAACG GTGAAACTGT TGTACTGGGC GGTATCTTCC AGTCTGAAGT TGCCACTCAG ACCACAAAAA CTCCGTTCCT GGGTGACATC CCCTATCTCG GGCGTCTGTT CAAGCGCACC GAGCATATTG ATGAGCGCAG CGAGCTTTTG ATCTTTATTA CGCCGAAGAT CATCAAGAAC GATATCTTGC AGTAA
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Protein sequence | MKSRNMHEQT GLGSRLAMFK KLNVCVGVIA IGLWSGLASA VTLQDLSFSS LPGERLEVTM QFDGTPPEPS GYTIERPARI AVDLKDTTSA LNQRSIPLGT GNAQSVTVVE TKDRTRLIFN LVELVPHDTV RTSNSLVMTI GGESDAVASN SSQPAQRTTT ASPASSNALA GVDFRRGKEG ECRVIVDLGS STATVNLNEL GGRIRLAMPD LKVPADLRRR LDVTDFATPV TRIDTFVEDG HAVVEIRPEG DYDYIAYQSG REFTVSVEAL SQEEAETRRE EKFPYTGEKL SLNFQDIEVR SVLQLIADFT GLNLVASDTV GGSITLRLQN VPWDQALDLI LKTKGLDKRQ IGNVLLVAPA EEIAAREKLE LETNKQIAEL APVRLDIIQV NYAKAADVVA LIQADEELIS SRGFVSSDAR TNTISVRETA EKLEEIRRLV STWDVPVRQV SIEARIVRAQ TNVAEDLGVR WGGAAYNVDG DDVITVGGSL GTLQEARDAA SGGSNTISFP GALGVDLGVS GDGASSFAIG WGSDDFLVDL ELSALESDGR AEVVSQPRVV TADRQTASIK SGEEIPYQEA TSSGATNIEF KEAVLSLEVT PQITPDDKII MDLVVNQDSR GEVTAGIPSI NTNEVTTQVL VANGETVVLG GIFQSEVATQ TTKTPFLGDI PYLGRLFKRT EHIDERSELL IFITPKIIKN DILQ
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