Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0813 |
Symbol | |
ID | 4656453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 920045 |
End bp | 920731 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639810772 |
Product | HAD family hydrolase |
Protein accession | YP_958097 |
Protein GI | 120553746 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00498763 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCTG TACGGATGGG AGGAGAAGGC TTGACGCTCG CGATTTTTGA TCTGGATAAC ACTTTGCTGG CCGGGGACAG CGACCACGCC TGGGGCGAAT TCCTGGTGGA AGAGGGCATG GTGGATGCGG AGGAGTACAA GCGGGCCAAC GACCGCTTCT ATCAGGAATA TCTGAATGGA GAGCTGGATG TTTTCCATTA CCAGCGCTTT GTCCTGGCCC CCCTCACCCG CCACAATCTG GAAGAGCTTG AAGGCTGGCG GGCTGCTTTC ATGGCCAAGA AGGTGCAGCC GATGATGCTG GACAAGGCGG TGAAGTTACT CGCGGATCAT CGCGAGCGGG GCCACACGCT GATGATCATT ACGGCAACCA GCCGTTTTAT TACCGAACCT ATCGCCGAAA TGCTGGGAGT GGATCATTTG ATTGCCACTG AGCCAGAGCT GGTGAACGGG AAATTCACGG GTGAAGTGGC GGGCACACCG AGTTTTCAGG AGGGCAAGGT GGAGCGGCTG AATGACTGGC TGACTGCCCA CGGCGAGAGC CTTGAGGGCG CCTGGTTCTA CAGCGATTCC CACAATGATT TGCCGCTGTT GCGGAAGGTG GATAATCCCG TGGCGGTGGA CCCGGACCCT ACCCTGGAGA AAACGGCAAT TGAGAATGGC TGGGCGGTGA TGTCTTTGCG GGATTGA
|
Protein sequence | MTPVRMGGEG LTLAIFDLDN TLLAGDSDHA WGEFLVEEGM VDAEEYKRAN DRFYQEYLNG ELDVFHYQRF VLAPLTRHNL EELEGWRAAF MAKKVQPMML DKAVKLLADH RERGHTLMII TATSRFITEP IAEMLGVDHL IATEPELVNG KFTGEVAGTP SFQEGKVERL NDWLTAHGES LEGAWFYSDS HNDLPLLRKV DNPVAVDPDP TLEKTAIENG WAVMSLRD
|
| |