| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0636 |
|---|
| Symbol | |
|---|
| ID | 4656149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 730470 |
|---|
| End bp | 732614 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810585 |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_957921 |
|---|
| Protein GI | 120553570 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGCAG CAGAGGCAAC GGTAGAAGAA CTGGCCAGAG AGCTCAGTTC CTACCTCGAT
ACCAATCGCA TCAATCAGGT GCGACGGGCT TACTATTACG CCGAGCAGGC CCACGAAGGC
CAGATGCGTA AAAGCGGCGA TCGTTATATT ACCCATCCCC TGGCTGTGGC CGGAATTCTT
GCCGACCTCC GGCTCGACCA TCAGAGCCTG ATGGCAGCCA TGCTTCACGA TGTCATTGAA
GATACCGGCA TTCCAAAAGA TGCGCTGGCG GAACAGTTCG GAGAGGATGT GGCCGAGCTG
GTGGATGGTG TCTCCAAACT GACCCAGATT GAGTTCCGCT CCCGGGCGGA GGCCCAGGCG
GAAAACTTCC AGAAGATGAC CCTAGCCATG GCCAAGGATA TCCGGGTGAT TCTGGTGAAG
CTGGCGGATC GCCTGCACAA CATGCGCACC CTTGGCCCCA TGCCATACGA GAAGCGCCTG
CGTATCGCCA CTGAAACCCT CGATATCTAT GCGCCCATTG CTAATCGCCT GGGCATGCAT
TCCATCTGTA CCGAGCTTGA AGATCTGGGT TTTTCCTCGC TCTATCCCAT GCGCGCCAAG
TACATTTCCA AGGCGGTGGA GAAGCTTCGT GGCAGCCACC GGGAGATCAT TGAAGACATC
CAGGGAAAAC TGCAGGAAAA GCTGGAGGAG CGTGGGCTTC CGGGCCGCAT TCTGGGGCGG
GAGAAACACC TGAACTCCAT TTATAACAAG ATGAAGTTCA AGCAGAAATC CTTCCATGAA
ATCATGGATG TGTATGCGTT CAGGATCATT ACGGATACCG AGGATAACTG TTATCGCATA
CTTGGCGCCG TACACAGTCT CTACAAGCCA CTGCCCGGGC GTTTCAAGGA TTACATTGCC
ATGCCCAAGT CGAATGGCTA TCAGTCCATT CACACCACCT TGTTCGGCAT GCACGTGAAC
ATCGAGATCC AGATCCGGAC CGAGGAAATG GAGCACATTG CCAACAATGG TATTGCTGCC
CACTGGATGT ACAAAAACGA AGCCTCCGGC GTGACCACCA TCAATCAATC CCGGGTAGAT
CGGTGGGTGA AGGGGCTCAT GGAAATGCGC GAACGCGCGG ATGATTCCAT GGAGTTCATT
GAACACGTCA AGGTCGATCT GTTCCCGGAC GAGATCTATG TGTTTACGCC CAAGGGCCGG
ATCATGGAGC TGCCAAGCGG GGCCACCCCG GTGGACTTCG CCTATGCAAT CCATACCGAT
ATTGGCAATG CCTCTGTGGC GTGTCGGATC AATCGCAATC TGGCATCTCT GAGTCAACCG
CTGCAAAGCG GGCAGACGGT GGAAATCATC ACCGCGCCTG GCGCCCGCCC GAACCCCGCC
TGGCTCAGCT TCGTGGTGAC CGGCAAAGCC CGAAGCAGTA TCCGGCATGT ACTCAAAACC
CGTAAGCGGA CCGAGTCCAT GGAGCTGGGT CGCACCCTGC TCAAACGTTC GCTCAAGGGT
TTTGGGGCCA AACTGTCGGA TATCAGCGAT GCCCAGAAAC AGGCGGTGGT TAATCACAAC
CAGGTCAACA GCTTTGATGA TCTGATCAGC GATATTGGTC TGGGCAACCG TATGGCCTAT
CTGGTGGCCC GTCAGTTGGT GTCCGGCAAT GACGTGATGG ACGCGCCGGC CAACCTGGAA
AATGCCCCGG ACAGCAAGCA GGGTGCCGTC ACCATACGCG GCACCGAAGG GCTCTTGGTG
CGCTTTGCCA ATTGTTGCAA ACCCATTCCC GGGGACCCGG TGGTTGGTGT GATGGATTCT
GGCAACGGCA TGGTGATTCA TTCAGATACC TGTTCCCGCC TGCCTGAGGG CGATGAAGGC
CGTGCCCGGC TGACCCACCT GAAGTGGGCC AAGGACATTA CCGATGAATT CTCGGTGGAG
CTTCGGGTTG AACTGGAGCG CCAGCGCGGG GTGATTGCCG AAGTAGCGAA CGCCGTTGCC
ATGGCAGACG GAAACATCGA GCGCATCAGT GTGGAAGACC AGAACGCGCG CTTCGGCATC
GTCAGCCTCG TGGTGCATGT GAATGGCCGC AAGCATCTGG CGCGGGTGAT GCGCAGGGTC
CGGAATATTC GTGCAGTGAC CCATATCGGC CGGGTTCGGC ACTGA
|
|---|
| Protein sequence | MVAAEATVEE LARELSSYLD TNRINQVRRA YYYAEQAHEG QMRKSGDRYI THPLAVAGIL
ADLRLDHQSL MAAMLHDVIE DTGIPKDALA EQFGEDVAEL VDGVSKLTQI EFRSRAEAQA
ENFQKMTLAM AKDIRVILVK LADRLHNMRT LGPMPYEKRL RIATETLDIY APIANRLGMH
SICTELEDLG FSSLYPMRAK YISKAVEKLR GSHREIIEDI QGKLQEKLEE RGLPGRILGR
EKHLNSIYNK MKFKQKSFHE IMDVYAFRII TDTEDNCYRI LGAVHSLYKP LPGRFKDYIA
MPKSNGYQSI HTTLFGMHVN IEIQIRTEEM EHIANNGIAA HWMYKNEASG VTTINQSRVD
RWVKGLMEMR ERADDSMEFI EHVKVDLFPD EIYVFTPKGR IMELPSGATP VDFAYAIHTD
IGNASVACRI NRNLASLSQP LQSGQTVEII TAPGARPNPA WLSFVVTGKA RSSIRHVLKT
RKRTESMELG RTLLKRSLKG FGAKLSDISD AQKQAVVNHN QVNSFDDLIS DIGLGNRMAY
LVARQLVSGN DVMDAPANLE NAPDSKQGAV TIRGTEGLLV RFANCCKPIP GDPVVGVMDS
GNGMVIHSDT CSRLPEGDEG RARLTHLKWA KDITDEFSVE LRVELERQRG VIAEVANAVA
MADGNIERIS VEDQNARFGI VSLVVHVNGR KHLARVMRRV RNIRAVTHIG RVRH
|
|---|
| |