| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0535 |
|---|
| Symbol | |
|---|
| ID | 4656233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 607703 |
|---|
| End bp | 608536 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639810487 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_957823 |
|---|
| Protein GI | 120553472 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCAGAT CACCCACCAT CTCTTTCATC GGCGCCGGCA ACATGGCCAG CGCCATCATC
GGCGGTATGC TGGATAGCGG ATTTCAGGCC GGCGACATCT GGGTGAGCGC CCCGGATGAC
GGCCATCTTC AGTCAATTCG CAAACGTTTC GGCGTCAGCG TCACAACCGA CAACCGCTAT
TGCGCCCAAC AGGCGGACAT TGTGGTGCTC GCGGTCAAAC CCCAGGTGAT GGGCGACGTC
TGCCGGGACA TTGCCCCGGT AGTTCAGAAC ACCCGCCCGC TGATGGTTTC CATTGCGGCC
GGGCTGACGG CCGGCACACT AGATACCTGG CTTGGTGGCG GGCTGCCACT GGTTCGGGTG
ATGCCCAACA CTCCGTCTCT GGTGGGCAAA GGTGCCGCCG GTCTGTTCGC CAACAGCCAG
GTGAAAGACG ATCAAAGAAA TGCGGTACAG AAAGTGTTCG AGAGCATCGG CTCGGCACTG
TGGGTTGACG ACGAAAACCT TCTGCACAGT GTCACCGCCC TTTCCGGCAG CGGCCCCGCT
TATTTCTTCC TGATGCTGGA AGCACTTGAG TCCGCCGCAA CCGAAGCCGG CATTGAGTCC
GAAACGGCTC GCGCCCTCGC CATTCAGACC ATGGCCGGGG CCGCCGAGAT GGCCGCGCGC
AGCGAGGATG ACCCCGGCCA GCTCAAACGC AACGTGATGT CCCCTGGCGG CACCACTGAA
CGCGCCATCA ACACCTTCGA GGAAGGCGGC CTGCGCGATC TGGTGAAAAA AGCCTACAGC
GCTGCCTTCG AGCGCTCACG CGAGATGTCC AGAGAACTGG CCGATAAACA GTAA
|
|---|
| Protein sequence | MSRSPTISFI GAGNMASAII GGMLDSGFQA GDIWVSAPDD GHLQSIRKRF GVSVTTDNRY
CAQQADIVVL AVKPQVMGDV CRDIAPVVQN TRPLMVSIAA GLTAGTLDTW LGGGLPLVRV
MPNTPSLVGK GAAGLFANSQ VKDDQRNAVQ KVFESIGSAL WVDDENLLHS VTALSGSGPA
YFFLMLEALE SAATEAGIES ETARALAIQT MAGAAEMAAR SEDDPGQLKR NVMSPGGTTE
RAINTFEEGG LRDLVKKAYS AAFERSREMS RELADKQ
|
|---|
| |