Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0487 |
Symbol | hemC |
ID | 4655048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 551667 |
End bp | 552608 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639810439 |
Product | porphobilinogen deaminase |
Protein accession | YP_957775 |
Protein GI | 120553424 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAC GTACCCTTCG CATTGCAACC CGCAGCAGCG CACTGGCGCT GTGGCAGGCG GAATTCATCA AGGCCGAGCT GGAAAGGCTG CATGACAACG TTGACGTTGA ACTGATCAAG ATCAAGACCC AGGGCGACAA GATCCTGGAC GTCCCCCTGG CCAAGATCGG CGGCAAGGGC CTGTTCGTGA AGGAGCTCGA AGAAGCCATG CTGGACGGCC GTGCCGATCT GGCCGTGCAT TCCATGAAAG ACGTGCCCAT GGAATTCCCC GAAGGCCTGG GGCTGGTCGC CATTTGCGAG CGTGAAGACC CCACCGATGC CTTCGTCAGC AATCAGTATG AACACATCGA CCAGCTGCCT GAGGGCGCGG TAGTAGGCAC CGCCAGCCTG CGTCGGGAAG CCCAGCTGCG GGCCAACCGC CCGGATCTTC AGATCAAGGT ACTGCGTGGC AACGTGAATA CCCGGTTGGC GAAACTCGAT GCCGGTGAAT ACGACGCCAT TGTACTGGCC AGCTCCGGCC TGAAGCGTCT CGGCTTCCAC GACCGTATCC GTTACTGTCT GCCAGACACG TTTTCCCTGC CAGCCGTTGG CCAGGGTGCT TTGGGCATCG AATGCCGGGT CGGTGACACG GAACTTCTGG AGCTGATTGA CCCGCTCAAT CACACCGACA CCTGGGACCG CGTCAGCGCT GAGCGGGCGC TGAACCGTCG CCTTGAAGGC GGTTGCCAGG TGCCCATTGC CGCCTATGCC CTGCTGGAAG ACGATAACAC CCTGTGGCTG CGGGGCCTGG TTGGCGCAGT CGATGGTACC CAGATTTTCC GGGTGGAAGG CCGTGCCCCG CGCGCCGAAG GTGAACGCCT GGGCCGTGAA CTGGCAGAAC AGCTGCTGTC CATGGGGGCC GACAAGGTGC TGGCTGAAAT CTATGGCCAC ACCCCACGCT GA
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Protein sequence | MSKRTLRIAT RSSALALWQA EFIKAELERL HDNVDVELIK IKTQGDKILD VPLAKIGGKG LFVKELEEAM LDGRADLAVH SMKDVPMEFP EGLGLVAICE REDPTDAFVS NQYEHIDQLP EGAVVGTASL RREAQLRANR PDLQIKVLRG NVNTRLAKLD AGEYDAIVLA SSGLKRLGFH DRIRYCLPDT FSLPAVGQGA LGIECRVGDT ELLELIDPLN HTDTWDRVSA ERALNRRLEG GCQVPIAAYA LLEDDNTLWL RGLVGAVDGT QIFRVEGRAP RAEGERLGRE LAEQLLSMGA DKVLAEIYGH TPR
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