| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0348 |
|---|
| Symbol | |
|---|
| ID | 4657328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 401825 |
|---|
| End bp | 402673 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639810303 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_957640 |
|---|
| Protein GI | 120553289 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTT CTGTACCTCG GTCCCGGTTG TTTGATGCCC TTTACCTGAG CTATCTGTTG
GCCTTTTTCC TGTATCTTGC GTTGCCTTTG CTGGTGACGG CCGTGTTCGC ATTCAACGAC
TCGCCGTTCC CGTCATTACC GTGGCAGGGT TTTACCCTGG ACTGGTATCT GGCCGACGGC
ACCGACGGGC GTACCGGGCT GTTTCACGAC GACGGATTGC TCAGTGCGCT CTGGGTCAGT
ACCAAAATTG CGTTCTGGGT GACGCTGGTC AGTGTGGGGC TTGGCTGCGT GAATGCAGTA
TTGTTCGAGC GGGTGGAGTT TCGCGGCAAG GAGCTGCTGT ACCTGTTGAT GCTGCTGCCG
CTGGTGATTC CGGGCGTGAT TCTCGGGGTA TCCATTCTGG TGTTCTACAG TGGCATGGCC
AACGATGTCT CCCGCTTGTG GGGTATCGAG CTGGACCTGT TCCGGCCGGG GCTGACACTG
GTGGTGATGG GGCAGGTTAC CTTCATTACC ACTCTGGCTA CTCTGGTGAT TGCCGCCCGG
CTGCGCAAAT TTGACCGACA GCTGGAAGAG GCCGCCCTGA ATCTGGGGGC CACGCCGCTT
GTGGCGTGGT TCACGGTTAC TCTGCCGTGG CTGCTTCCCT CCATCCTCGG GGCCGCGGCG
ATGGCGTTTT TGATGTCCTT CGAGAACTTC AATACCACGG TCATGCTCAC CGGTAGTGAT
ACCCCGCTCA CCGTGGCCCT GTTCAATCGT CTGCGGGAAG GCTCAACGCC GGTGTTGAAC
GCGGTGGCGC TGTTTCTGAT GCTGGTGTCT GCGTTGCTTG CGCTGTTTAC CCTCCGACAA
AAAAGTTGA
|
|---|
| Protein sequence | MIRSVPRSRL FDALYLSYLL AFFLYLALPL LVTAVFAFND SPFPSLPWQG FTLDWYLADG
TDGRTGLFHD DGLLSALWVS TKIAFWVTLV SVGLGCVNAV LFERVEFRGK ELLYLLMLLP
LVIPGVILGV SILVFYSGMA NDVSRLWGIE LDLFRPGLTL VVMGQVTFIT TLATLVIAAR
LRKFDRQLEE AALNLGATPL VAWFTVTLPW LLPSILGAAA MAFLMSFENF NTTVMLTGSD
TPLTVALFNR LREGSTPVLN AVALFLMLVS ALLALFTLRQ KS
|
|---|
| |