Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_0343 |
Symbol | potC |
ID | 4657323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | + |
Start bp | 396831 |
End bp | 397601 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639810298 |
Product | spermidine/putrescine ABC transporter membrane protein |
Protein accession | YP_957635 |
Protein GI | 120553284 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGCT GGCTGCCCCG CACCTACCTG ACGCTGGTGT ATCTGCTGCT GTACGTGCCT ATCGTGGTAC TCGTGGTGTT CTCCTTCAAC GATTCCCGCA CCGGTTACGA ATGGGGTGGC CTGAGCCTGC GCTGGTACGA AGCCCTGTTG AACAACCGGG CCATGGTGCA GGCCATGTGG AATTCCCTCT GGCTGGCGCT CTCCGCGGCC ACTGTGTCGA CGTTGATCGG CGCGCTCACC GCACTGGCAC TGCACCGATA CCGGTTCCGG GGCAAGAAAG TACTCAATGG CATGCTGTTT GTGGTGATGA TGTCGCCGGA AATTGTCCTG GCGATTTCGC TGCTGGCGCT GTTTCTGCTG GTGGGGCTGC AGCTGGGGTA TGTATCCCTG TTGCTGGCCC ACGTTACCTT CTGCCTGCCG TTTGTGGTCA TCACCGTGAT GGCCCGGCTC AGCGGGTTTG ACGAACGCCT GCCGGAGGCG GCCCGGGATC TGGGCGCCAA CGATTTCACC ATGACCCGCA CGGTACTGAT TCCGGTGATC ATGCCGGCCC TGCTGGCGGG CTGGCTGCTG GGGTTTACAC TGTCACTGGA CGACGTGGTG GTCAGTACGT TTGTCAGTGG CCCGAGTTAT GAAATTCTGC CATTGCGCAT CTATTCGATG GTGCGGGTGG GCCTGAAGCC CGAAGTGAAT GCCCTTGGCA CCCTGCTACT GGTATTCTCA CTGGTCATGT TGATCTTGTC TCAATGGATA CTGTTAAGGA GCAAACGATG A
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Protein sequence | MNRWLPRTYL TLVYLLLYVP IVVLVVFSFN DSRTGYEWGG LSLRWYEALL NNRAMVQAMW NSLWLALSAA TVSTLIGALT ALALHRYRFR GKKVLNGMLF VVMMSPEIVL AISLLALFLL VGLQLGYVSL LLAHVTFCLP FVVITVMARL SGFDERLPEA ARDLGANDFT MTRTVLIPVI MPALLAGWLL GFTLSLDDVV VSTFVSGPSY EILPLRIYSM VRVGLKPEVN ALGTLLLVFS LVMLILSQWI LLRSKR
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