| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0070 |
|---|
| Symbol | |
|---|
| ID | 4655252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 90209 |
|---|
| End bp | 91129 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639810026 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_957364 |
|---|
| Protein GI | 120553013 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.915118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AAGTGAAGGC GCTGCCGATC CAGAATCCAA CGCATGCGAG CACTATTTCC
TGGCGCGATT ACCTGGAACT GACCAAGCCC CGGGTAGTGG CATTGATGAT TCTTACCTCG
GTGATCGGCA TGCTGCTGGC AGCACCAGGC GTTCCCGAAT GGAGCGTGCT GCTGTTCGGC
AACCTGGGAA TCGCCCTGCT GGCCGGCGCG GCTGCGGTGG TGAACCACGT GGTGGATCAG
AAGATTGATA CCGTGATGGC CCGCACTCGC AAACGTCCGG TGGCGACTGG CCGGATTGCG
CCGCTGGACG CCCTGCTGTT TGCTACCGTG CTGGCGGCCC TGGGTATGGT CGTGCTGGTG
TGGCAGGTGA ACGAGCTGAC CGCCTGGCTG ACGCTGGCGT CCCTGGTGGG TTACGCCGGT
GTTTACACCC TGTTTCTGAA ACGGGCGACG CCACAGAACA TTGTCATCGG CGGGCTGGCC
GGTGCCATGC CGCCACTGCT GGGCTGGACC GCGGTCACTG GCCAGGTGGA AGGCCACGCG
CTGTTGCTGG TGCTGATCAT CTTCGCCTGG ACGCCACCGC ATTTCTGGGC TCTGGCCATC
CACCGCAAGG AGGAATACGC CAAGGCTGGT ATTCCCATGC TGCCGGTGAC CCACGGCAAT
CGTTACACCG AACTGCATAT TCTGCTCTAT ACCCTGATGC TGCTGGCCGT CAGCCTGCTA
CCGTTTGTCA CAGGCATGTC CGGCGGTATT TACCTGGTGG GCGCCCTGGC GCTAGGCTTG
AGGTTCCTGC AATATGCTGT TCGCCTGCTG CGCGGCGACG ACCGGCGGGT AGCGCTGAAC
ACCTTCAAAT ATTCCATCAC CTATCTGATG GCGTTGTTTG TGGTGTTGCT GGTAGATCAT
TTTGTGTTTG TCCCGGCCTG A
|
|---|
| Protein sequence | MSEQVKALPI QNPTHASTIS WRDYLELTKP RVVALMILTS VIGMLLAAPG VPEWSVLLFG
NLGIALLAGA AAVVNHVVDQ KIDTVMARTR KRPVATGRIA PLDALLFATV LAALGMVVLV
WQVNELTAWL TLASLVGYAG VYTLFLKRAT PQNIVIGGLA GAMPPLLGWT AVTGQVEGHA
LLLVLIIFAW TPPHFWALAI HRKEEYAKAG IPMLPVTHGN RYTELHILLY TLMLLAVSLL
PFVTGMSGGI YLVGALALGL RFLQYAVRLL RGDDRRVALN TFKYSITYLM ALFVVLLVDH
FVFVPA
|
|---|
| |