| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0042 |
|---|
| Symbol | |
|---|
| ID | 4656253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 64131 |
|---|
| End bp | 65066 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639809998 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_957336 |
|---|
| Protein GI | 120552985 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATTG TGTTTGCCGG CACGCCGGAT TTCGCCGCCA CCGCCCTGAA AACCCTGCTG
AATGCCGGTT ACGACATCGT CGGCGTTTAC ACCCAGCCTG ATCGCCCCGC CGGCCGCGGC
CGCAAACTGA TGCCCAGCCC GGTTAAACAG GTGGCACTGG ATACTGGTAT TCCCGTGTAT
CAACCGGTCA GTCTGAAGCC AGAAGAGGCC CAACAGGAAC TGGCGTCACT GCAACCGGAT
GTGATGATCG TGGCTGCCTA TGGCCTGATT CTGCCCAAGG CAGTGCTGAA CATACCAACC
CATGGCTGCC TGAACATTCA CGCCTCCCTG CTGCCGCGAT GGCGTGGCGC CGCCCCTATC
CAGCGGGCGA TTGCCGCCGG CGATGCCGAA ACCGGAATCA CCATCATGCA GATGGACGAG
GGCCTGGATA CCGGCGACAT GTTGCTGAAA CTGGACACCC CCATCAGCGC CGACGATACC
GGCGGCAGCC TGCATGACCG GCTGGCCGAG ATGGGCGGCA AGGCTATTGT GCAGGCCATG
GAGCGGCTGG CCAAGGGCGA TCTGACCGGC GAAGTCCAGA ATGAGGCAGA GGCCAACTAC
GCCCATAAGC TGTCGAAGGA AGAGGGCCAC ATCGACTGGA GCCGAAGCGC GCAGGAAATC
GAACGACTGA TTCGCGCGTT CAACCCCTGG CCCGGTACCT TTACCGATCT TGGCGAGCAA
CGTATCCGTA TTCATCAGGC CAGTGCCCTG AAGCAGGGCA GCGACAAGGG TCCCGGTACC
GTGATTGCCC GGGAGCGGGA CGGTGTAGAC GTTGCCTGCG GCACCGGCAC GCTCAGAATC
ACTTCCGCGC AGTTACCAGG CAGCAAGGCC CAGAGCATCA ACGATCTGAT CAACGGTGGT
AAGCAGGTAT TGCTGCCCGG CCAGGAGCTG AACTGA
|
|---|
| Protein sequence | MRIVFAGTPD FAATALKTLL NAGYDIVGVY TQPDRPAGRG RKLMPSPVKQ VALDTGIPVY
QPVSLKPEEA QQELASLQPD VMIVAAYGLI LPKAVLNIPT HGCLNIHASL LPRWRGAAPI
QRAIAAGDAE TGITIMQMDE GLDTGDMLLK LDTPISADDT GGSLHDRLAE MGGKAIVQAM
ERLAKGDLTG EVQNEAEANY AHKLSKEEGH IDWSRSAQEI ERLIRAFNPW PGTFTDLGEQ
RIRIHQASAL KQGSDKGPGT VIARERDGVD VACGTGTLRI TSAQLPGSKA QSINDLINGG
KQVLLPGQEL N
|
|---|
| |