| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1502 |
|---|
| Symbol | |
|---|
| ID | 5327012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1563583 |
|---|
| End bp | 1564722 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640788926 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001325690 |
|---|
| Protein GI | 150401924 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0329329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAT TTTGTTATCG GTGCGGTTAT GAGGGGGAAT TATTAGATGG ATTATGCAAT
AAATGTTATT CCCAGCTTAA TCCCTTATTT AACATAACCG ATGAAGTTAG AATAGAAGCA
TGTCATATGT GTGGTTCATA TAAACGAAAA AATTGGCAAG ACCCACAAGA AAAAGAATTA
GATGACATAT TAACAGAAAT GGCATATTAT GCCGTAAAAG ATAATATTAA AGTAAATAAT
AAAAATATAG ATATGGAGAT AATACCATTA GAGCCACAAC AATTACCAGG GGGTAAAAAG
TCAAGAGTGG TAGTCCCTAC AAAAATAATT GCCGAAGGTA AATTATTGGA TGAAAAAGAA
AACAGAATAG AAGAAAAGGA AATTGTAGTT CATATTTTAA TGGTGCAATG TCCAAGATGT
TCGCGATATA TGTCCAATTA TTATGAGGCA ATACTTCAAG TTAGGGCAAT GAACAGGTAT
TTAACAGAGG AAGAGCGGGA AGAATTGGAC AATTTTATAA GAGATGAAGT AGATAAAAGA
ATGAAAAAAG ATAGAATGGC ATTTATATCT AAATTTATAC CTCAAAAAGA AGGATTGGAT
TATCAAATTG GTTCTATGGG CGGGGCTCGG TATCTTGCAT CAATTGTGAA ATCAAAATAT
GGCGGTAAAA CATATGAAAC TGCTAAATTA GTTGGTGTTG AAAAAGACAC CGGAAAAGAC
ATGTATAGAA TAACAGTTGT TGTTAGGATA CCCGAATATA CTGTTGGAGA TATTATTAAA
TATAATAAAG GTAGTAAAAC AGGCAGTAAA ATAAATAATA ACAATGATAT AATATGTAAA
GTAGTTTCAA TGAATGAAAA TAAACTATAT TTAGAATCAC TACTTAGAAG AGATAAAATA
TCATTGGTAT GGAGTGATGC CGAAAAAAAT ACTTCGTTAT TAAAAGAAGG AAAAGAATGC
CAAACTGCAA CAGTAATTTC TGTATCTCCC ACTACAATAA TGGCAATGGA TAATGAAAAT
TATGAAATAT ATGAATATGA CAATATTTTT AATAATAAAA ATAATATAAA TGAAGGCGAC
ATATTAAAAA TATTTAAAGA TGAAAATATA AATCATATAG TAAATAAAAT AGATAAATAA
|
|---|
| Protein sequence | MKGFCYRCGY EGELLDGLCN KCYSQLNPLF NITDEVRIEA CHMCGSYKRK NWQDPQEKEL
DDILTEMAYY AVKDNIKVNN KNIDMEIIPL EPQQLPGGKK SRVVVPTKII AEGKLLDEKE
NRIEEKEIVV HILMVQCPRC SRYMSNYYEA ILQVRAMNRY LTEEEREELD NFIRDEVDKR
MKKDRMAFIS KFIPQKEGLD YQIGSMGGAR YLASIVKSKY GGKTYETAKL VGVEKDTGKD
MYRITVVVRI PEYTVGDIIK YNKGSKTGSK INNNNDIICK VVSMNENKLY LESLLRRDKI
SLVWSDAEKN TSLLKEGKEC QTATVISVSP TTIMAMDNEN YEIYEYDNIF NNKNNINEGD
ILKIFKDENI NHIVNKIDK
|
|---|
| |