Gene Maeo_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1488 
Symbol 
ID5326777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp1549782 
End bp1551590 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content29% 
IMG OID640788912 
ProductPUA domain-containing protein 
Protein accessionYP_001325676 
Protein GI150401910 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAC CAATTTATTA TAATATTGGA AGAAGTTGTA AAGAAACTTA TTTTAAAAAG 
GATTACGACA ATAAAAACAT AAATATTACT CCAAAATTAA TCGACGACAA TATTATTAAA
AATATCAAAC GACCATTATT AAAAATACCT TTTGATGCAC CTGAAAAAGT TGCAAACTAT
ATTTTTGAAC AAAATAAAGA TAAAATAAAA GGAACGATTA AATTAAGCGA TAACGATAAC
GATAATAACG ATAATAACGA TAATAACGAT AGTGATAAAG ATAATAATAG TATAAATTAT
TATATATTAA ATCTCGGAAA ATATATTGAA AAAATCAACG AATTAACCGA AGAATTAAAA
AATACTGATT TAATAATAAT TGCAGATGGA AGAAGATTAA TTAATAGAAA AGAACTTTTA
TTAATATCTG AATTAAGAAA TATAATTTCC CCAAACACTG CAATATATTT CCCAACAGCA
TTGCCAAATG AAATTCCACT GCTAACATAT ATGGGTGTAG ATTACTTTGA TAATTCTTCG
GCATCATATT ATGCTTCAAA AGGATACAAA TTTACAAAAA ATAGAATAAT GGAAACAACC
ATACAATTTA ATGAATTGGT AGAGCACAAT AAATCTATTA TAAGGGAGCT CCTTGAAGAA
ACAAAATACT GTATTAAAGA GGGTAGTTTA AGAAATTTAG TTGAAGAAAC CAGTATTTCA
AATCCATACC TTAGGGGCAA TTATAAGAGA TTTAATCCTG ATGTAAGAAA TATCCCTCTA
TCCAGTGGGA AAAAAATAAT TGTATCCATT GACGAAACTA CAATTCCAGA GGTAAAAAAA
TACACTGAAA GGCTTGGCAA TTATGAAGCT TTTACAAATA TTGTTGTATT ACTTCCTTGT
TCGTCAAAAA AACCATATTC GTTCTCAAAA TCTCACCAAT ACTTTGTAAA TGCAATTAGA
TCTTCAAATA CAGTAGTTGA AGAAGTTGTA TTGACCTCCC CATATGGTGT AGTTCCAAGA
GCTTTGGAGG GAATAGTAAA TTATGATATT CCTGTTGTTG GGTCATGGAG CTCCGAGGAA
ATTGAATTTA TTAACAGGCA CTTAAAAACT TATTTAGATA ATACGGATAA TAAATTTGGA
ACTATATCTG TAATAGCTCA CCTTCCAAAA CATTATTATG AAATATTGGA TAAAAATTTA
ATAGAAAAAT ATGATATAAT ATCTACGGTA GAAGATGACC GACCCACGAC CAATAATTCG
CTTGCTACAT TAAAAGATAC CCTCAAAGAA ATTAGTGCAG ATAAATACGG TATTGATAAT
AACAAAGAGA ATAATAAAAA TGAACGAGAT AATAAGGATA ATAATGCCCC AGTAAAAGCC
AATAGGCCCA GTATAAGAAA ACAGGTGATG CACAACTACC AGCAACTTGC AAAATTCCAA
TTTGGCAGTA ATTTCATACC TGATGATACA GTAATTAAAG GAAGGCATAA AAAGTTTTTT
GCGAAAATAA ATAATAAATT AACTCAGATA TGTTCATTAA ATTATGAAAA TGGGCTTTTT
GTGCTAACCT ATGAGGGTGG AAAATTATTG GGAAAAAATA AATGGGTAGA AGTTAATTTT
AAGGCTAAAA AAGGCTCATT ATTTGCACCT GGTTTTAAGG ATTGTGATGA AAATATATCC
GTAGGAGATG AAATCGTAAT AATTTATGAG GGGGAAGTAA TTGGTGTAGG TAGGGCATCA
ATGAGTGGGG CAGAAATGAA AAAAGCTAAA AATGGGGCAT TGTTAAATAT TAGACACTGT
AAAAAATAA
 
Protein sequence
MLEPIYYNIG RSCKETYFKK DYDNKNINIT PKLIDDNIIK NIKRPLLKIP FDAPEKVANY 
IFEQNKDKIK GTIKLSDNDN DNNDNNDNND SDKDNNSINY YILNLGKYIE KINELTEELK
NTDLIIIADG RRLINRKELL LISELRNIIS PNTAIYFPTA LPNEIPLLTY MGVDYFDNSS
ASYYASKGYK FTKNRIMETT IQFNELVEHN KSIIRELLEE TKYCIKEGSL RNLVEETSIS
NPYLRGNYKR FNPDVRNIPL SSGKKIIVSI DETTIPEVKK YTERLGNYEA FTNIVVLLPC
SSKKPYSFSK SHQYFVNAIR SSNTVVEEVV LTSPYGVVPR ALEGIVNYDI PVVGSWSSEE
IEFINRHLKT YLDNTDNKFG TISVIAHLPK HYYEILDKNL IEKYDIISTV EDDRPTTNNS
LATLKDTLKE ISADKYGIDN NKENNKNERD NKDNNAPVKA NRPSIRKQVM HNYQQLAKFQ
FGSNFIPDDT VIKGRHKKFF AKINNKLTQI CSLNYENGLF VLTYEGGKLL GKNKWVEVNF
KAKKGSLFAP GFKDCDENIS VGDEIVIIYE GEVIGVGRAS MSGAEMKKAK NGALLNIRHC
KK