Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1448 |
Symbol | |
ID | 5326297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 1505400 |
End bp | 1506923 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640788871 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_001325636 |
Protein GI | 150401870 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000936916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTTA CAGACGAGAT ATTAGATTTT TTAATAAAAA AGAATATAAA AACAGTTTTT TCATATCCTG GGGAACAAAT TCTTCCATTA TACAACGGTT TAAATGAATC ACCCATAAAA AATATAATGG TAAGAAGCGA ACAGGGAGCT TCACATATGG CGGACGGATA CAGCAGAATT ACAAATCATG TTGGAGTATG TTTAGCAACT GCGGGACCTG GTGCAACAAA TTTAATGACT GGAATAGCTA CGGCATATAA AGATTCCTCC TCTGTGATAG CAATTACAGG GAGATGTAAA AAAGAATATA TTAATAAAAA CTATTTTCAA GAAATAAATA TGGATTTTTT AAATTTGCAA AATGGATATT TTGTAGATGC CCCGGATATA AAATATTTTG AAAAGGCATT TAATGAATCA ATAAATACCA AAAAGCCCAT TCACTTAAAT ATCCCGTATG GCGTATTATT GGATAGCAAT GACGACAATA ACCGTAATAA TAATGAAAAT AACTATAAAG ATGAAAAAAA TAATAAAAAA GACAATACAT CTATATTAAA TAACATAGAT TATAACACCA CAGGTAAACC ATTGTTGTTG ATTGGCCAGG GTATTTATGG GAATTTATCT TATAATGACA TATTAAAAAT AAATGACATA TTAAAAAATA GCCACATTCC AATAGCCACA ACATATCCTG CAAGGGGAGT TATTGATGAA AATAACCCAA TCTGTCTTGG TTTAGTTGGG GGAAGAGGCA CAGAAAAAGC AAACCAATAT ATTTTAAATT GTGATACTGT GTATTGCTTA GGAGCCTCTT TATCATACAA TACATTACCT CCCCTAATTA GAGATAAAAT AATACCTAAA ATAAAAGATA TACCAATAAA TATTAATAAT TTAGAGGATA TTGAATTATT AATAAATACA TTAAACTACA AATATAATAA TGTATATATT AATAATATCG GCAATAATAT TAATCCCAAT AATAAATTAT GTGGAGATTA TTCTTTAAAA ATTAATGAAA TATTAAATAA TTTGCCAGAT GATACCATAA TTACGACAGA TGCAGGAAAT CATACAGTTT TTGTATCATT ATTAAAAACT TGTGGAGCTC CGAAAAATAT TATTTCTTCC CACAGCATGG GGACTATGGG ATTTGGGCTT CCTGCATCAA TTGGAGTTAA ATTTGGATGT TTGGATAATA ATATTGATAG GGAAGTAGTT TCGATAAATG GAGACGGCGG GTTTCAAATG AATATACAAG AATTAGCTAC CGTTTCCGAA AACAACTTAA AAATATTAAT AATTATAATG AAAAACAACA GATTAAACAT ATTTGGAGAT ATTAAAAATC CAGATTTCAA TAAAATAGCA GATGGATATA ATATAGATAA TATATATATC TCAGATATTG ATGAAATAGA AAATAACATA AAATATTATT TAAATAACAA CAAACCTTAT TTAATGGTAG TTGAATGTGA AAATGAGTCA TTGCCAAAAA AATCATTTAA TTAA
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Protein sequence | MNFTDEILDF LIKKNIKTVF SYPGEQILPL YNGLNESPIK NIMVRSEQGA SHMADGYSRI TNHVGVCLAT AGPGATNLMT GIATAYKDSS SVIAITGRCK KEYINKNYFQ EINMDFLNLQ NGYFVDAPDI KYFEKAFNES INTKKPIHLN IPYGVLLDSN DDNNRNNNEN NYKDEKNNKK DNTSILNNID YNTTGKPLLL IGQGIYGNLS YNDILKINDI LKNSHIPIAT TYPARGVIDE NNPICLGLVG GRGTEKANQY ILNCDTVYCL GASLSYNTLP PLIRDKIIPK IKDIPININN LEDIELLINT LNYKYNNVYI NNIGNNINPN NKLCGDYSLK INEILNNLPD DTIITTDAGN HTVFVSLLKT CGAPKNIISS HSMGTMGFGL PASIGVKFGC LDNNIDREVV SINGDGGFQM NIQELATVSE NNLKILIIIM KNNRLNIFGD IKNPDFNKIA DGYNIDNIYI SDIDEIENNI KYYLNNNKPY LMVVECENES LPKKSFN
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