| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1142 |
|---|
| Symbol | |
|---|
| ID | 5327077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 1196393 |
|---|
| End bp | 1197418 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640788545 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_001325331 |
|---|
| Protein GI | 150401565 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTG TTGATAAAAT AAAAATAAGT ATATTTGTAA TGTTTAGTTT AATAATGGCA
TATGCTGGGC TTATGGCATA TTTTGAAGGA TTAAATACAT TGGACGCCAT ATATTATTCA
ATAACCACAA TTACAACGGT TGGTTTTGGG GATTTTGTTC CAATAACTTC GAACGGTAAG
ATTATTACTG CAATATATGT TCTATTAGGT GTTAGTATTG GATTATATAC TCTCGGTAAT
TTTGCCGACT TTTTTATTGG GGGTTATTTT CAAAAAACAA AGCAGTTGAA AATTATGGAT
AAAAAAATAA GTAAATTAAA AAATCATTAT ATTATATGTG GATATGGTAA AAGTGGAAGG
GTTGTTGTAG ATAAATTTGA AAAAGAAGGG ATTGAATATG TCGTGATAGA TAATAATATA
GATACATTGG AGAACGAACT ATCAAATAAT CCTAATTTTA AATATATTGT AGGCGATGCC
ACTCATGATG AAATATTATA TAATGCAAAA ATAAATGATG CAAAAGGACT TATTTCATCA
GTTTCAAATG ATTCTGATAA TGTATATATT GTATTATCAT CAAGAAGAAT AAATCCTGAT
TTATATATTG TAGCAAAGGC AGATGAGCAA GTTGCTATGG ATAAACTTCT TATTGCAGGG
GCAGATAAAG TTGTTTCTCC TTATGTAATT GGCGGTTTAA GAATGGCTGA ATTGGCAGTA
AAGCCAGGAA TATTAGATTT TGTTTCAACA TTTATGTCCA TAGCAAAATA TGAATATGAT
GAAGATTTAG AGATACGAAA AATAATAGTT GAAGATGGCT CGGAGCTCCA CAATAATACA
ATATTAAATA CAAATATCCG ACAAAAAAGT GGTGCTACAA TTATTGGAAT TAAGAAAGAA
AATAATTTAA TAACAAATCC TCCGGCAGAT ATTGTTCTGG ATTCAGATGA TATATTATAT
GCATTTGGAA CAAAAGAACA ACTTGATAGT TTGGAAAATC TTGCCAAAAA ACAAAAAAAA
CAATAA
|
|---|
| Protein sequence | MDVVDKIKIS IFVMFSLIMA YAGLMAYFEG LNTLDAIYYS ITTITTVGFG DFVPITSNGK
IITAIYVLLG VSIGLYTLGN FADFFIGGYF QKTKQLKIMD KKISKLKNHY IICGYGKSGR
VVVDKFEKEG IEYVVIDNNI DTLENELSNN PNFKYIVGDA THDEILYNAK INDAKGLISS
VSNDSDNVYI VLSSRRINPD LYIVAKADEQ VAMDKLLIAG ADKVVSPYVI GGLRMAELAV
KPGILDFVST FMSIAKYEYD EDLEIRKIIV EDGSELHNNT ILNTNIRQKS GATIIGIKKE
NNLITNPPAD IVLDSDDILY AFGTKEQLDS LENLAKKQKK Q
|
|---|
| |