Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1076 |
Symbol | |
ID | 5327069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 1120631 |
End bp | 1121224 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640788472 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001325265 |
Protein GI | 150401499 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATG AAGAGATGAT AACAGTTTCC GATGTCGTGG AGTATATGTA CTGCCCAAGA TTTGTTTATT TTGAGAGAGT TTTAGGCATT CCACAGCATG AAGAAAAAAG GGAAAAAGTT GTTATTGGTA GGAACATCCA TGAATTAAGG GAGAAAATAA ACAAAGGATA CATTAGAAAA AGTATAAATG CAAAATCAAA ATACATTGAT GTTTATTTAT CATCTAAAAA GTATAGAATT GTTGGGGTAG TGGATGAGAT TGTAGAGCTT AGGGATGGTA GCTATTCACC ACTTGATTAT AAGTTCGCCG AGTTTAAGAA TAAGTTGTTT AAGACTCATA AGTATCAATC GGTGCTTTAT GGGTTGTTAA TTAAGGATAA TTTTGATGTA GATGTTAAAA AAGGCTATGT GGTTTATGTT AGAAGCGGGA ATTTAGTTAA GGAAATAGAA TTTAAGAAAA AAGATTTTGA TGATGCAGTT GCCTTTGTCG ATTTGATATT TGATATAATT GAAAATGAAG AATTTCCTGA TGGTATTAAG GTAAATAAAA GAAAATGTAT TGATTGCTGT TATAGGAATG TGTGTTGTAA GTGA
|
Protein sequence | MSDEEMITVS DVVEYMYCPR FVYFERVLGI PQHEEKREKV VIGRNIHELR EKINKGYIRK SINAKSKYID VYLSSKKYRI VGVVDEIVEL RDGSYSPLDY KFAEFKNKLF KTHKYQSVLY GLLIKDNFDV DVKKGYVVYV RSGNLVKEIE FKKKDFDDAV AFVDLIFDII ENEEFPDGIK VNKRKCIDCC YRNVCCK
|
| |