Gene Maeo_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_1074 
Symbol 
ID5326885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand+ 
Start bp1119336 
End bp1120340 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content30% 
IMG OID640788470 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_001325263 
Protein GI150401497 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAC TTTTGAAAAC TAATGGATTT TTCATATCTA AAAAAGAAGA TAGATTCCGC 
GTAGAATTAG AAAAAGATGG TAAAATCATA AAAACAGACA TACCTGCAAC AAAAATAGAA 
AGAATAATCC TTTCAAACAA TGGAACAATC ACTACGGGGG CGATATCTCT TGCCATTGAA 
AATAATATTC CAATAATATT TTTAAAATGG GAAGAACCAA CAGGCATGAT TTGGCATTGT 
AGAATTGGAA AAACTGCTAA AACTCGAAGA AGTCAGCTAA AATTTAGTGA ATCCATTAAT 
GGCATAAGGT TTGCGTCCAA TTGGATTAAA CAAAAGATGG GAAACCAGTT GAATTATCTA 
AAAGACTTAA AGAAGAACCA TAATCATAAA GGTGATTTTG ATACAGTAAT AAAAAATATT 
AATAACTACA TTATGGAGCT CACCCAATAC ACAAATAACA TCGATGATAA ATTACCACAC 
AGAGAAATAA AAGATACTAT AATTGGGATA GAAGGAATTG CTTCAAAATA CTACTTTGAA 
GGTATAAATC ATGCCCTGCC TAAGAATTAT AAATTCAAAG AAAGAAGTAG AAGACCTGCA 
AGGGATAAGT TTAATGCCCT TCTAAATTAT GGATATGGAA TGCTTTATCC AATGGTTGAA 
AAATGCCTTA TTGTTGCAGG ATTAGACCCA TATGTTGGTT TTATACATGC CGATAATTAT 
AATAAAACTA CACTGGTTTA TGATGTAATT GAAATGTATA GGGCCCATAT AGATAGAGGA 
GTTGTGAATT TTATAAACTC TAAAAAAGTT AAGGGTAGTC ATTTTAATAT TTTGGAAAAC 
GGGATTTCAT TATCTGATGA TGGAAAGGGG GAGTTTGCAC CGTATATAAA AGATATCGTA 
TTTGGAAAGG AATTTTATTT TAAGAATAAA AAATATTTAT TGCCTGATTT TATACAGAAG 
GAATGTTATG AGATTGCCAA ATCAATAAGG GGGAAGATTT TATGA
 
Protein sequence
MDLLLKTNGF FISKKEDRFR VELEKDGKII KTDIPATKIE RIILSNNGTI TTGAISLAIE 
NNIPIIFLKW EEPTGMIWHC RIGKTAKTRR SQLKFSESIN GIRFASNWIK QKMGNQLNYL 
KDLKKNHNHK GDFDTVIKNI NNYIMELTQY TNNIDDKLPH REIKDTIIGI EGIASKYYFE 
GINHALPKNY KFKERSRRPA RDKFNALLNY GYGMLYPMVE KCLIVAGLDP YVGFIHADNY 
NKTTLVYDVI EMYRAHIDRG VVNFINSKKV KGSHFNILEN GISLSDDGKG EFAPYIKDIV 
FGKEFYFKNK KYLLPDFIQK ECYEIAKSIR GKIL