Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0578 |
Symbol | |
ID | 5327629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 596870 |
End bp | 598903 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640787969 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_001324775 |
Protein GI | 150401009 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT TTAAAATGGT CCATACAGTA TGTCCATACT GCGGATGCGG ATGCGGAATA GATTTGACCG TAAAAGATGA TAAAATCGTC GGGACTCATC CGTTTAAAAG ACATCCAGTA AATGAAGGAA AAACATGTAT TAAAGGAAAT TACTGCCATG AATTTGTTCA TAGTGACGAG CGACTAAAAA AACCATTAAT TAAAAAAGAT GGTCAATTTG TTGAATCCAG CTGGGAAGAG GTTTTGGATT TAATTGCAAG TAAATTAAAG AAATATACTC CTGATGAAGT GGGTTTTTTC TCATCTGCAA GATGTACGAA TGAGGATAAT TATATATTCC AAAAATTTTC AAGAGCAGTG ATGAAAACAA ATAATATAGA TCATTGTGCG AGAATTTGAC ACTCTGCAAC TGTTGCAGGT CTTGGGGAAG CTTTTGGGTC TGGTGCCATG ACAAACTCAA TTGAAGATAT TGAAGAAGCA AATTGTATAT TTATTATAGG TTCAAACACA TTTGAACAGC ATCCGATAAT TGCGAGAAGA ATAATTAGGG CAAAAGAAAA CGGAACTAAG GTCATAGTTG TTGACCCGAG AAAAACGATG ACTGCCCAGC AGGCCGACAT ATTTCTCCAA ATAACTCCTG GAACAAATGC TGCCATATTA AATGGTTTGA TAAATGTAAT AATAAAGAAT AATTTAATCG ATAATGAATT CATAAAAAAT AGGACAAAAG GATTCGCAGA GTTAAAAAAG TCTGTGGAAA AATACACTCC CGAATATGTT TCAAAGATTT GTGGGGTTTC ACCTGAATTA ATAGTGGAAG CGGCAAAAAT ATATGCAACT TCTGAAAAGT CATCGATATT ATATTGTATG GGCGTGACTC AGTTCATACA TGGTGTAGAT AATGTTAAAT GTTGCTGTAA TTTATCATCT ATAACGGGAA ATATTGGAAA AAGAGGAACC GGAGTTAATC CATTGAGGGG ACAAAACAAT GTTCAGGGGG CCTGTGATAT GGGAGCTCTA CCTAATGTAT ATCCTGGATA CCAAAAGGTA AATGTCCCCG AAATATATGG TAAATTCGAA GAACTTTGGA ACACCGAATT AAGTCATGAT GTGGGACTCA CAATTTCAGA AATGATTGAA AAATGCGGAG ATGAATTAAA ATGTCTGTAT ATAATGGGGG AAAACCCAAT GGTTTCTGAC CCAGATATAA ACCATTTAGA GCATGCATTT GAATCCCTAG ATTTCCTCAT TGTTCAGGAT ATATTCCTAA CCGAAACAGC CCAAATGGCA GATGTTGTTT TACCCTCTGC GTGTTGGGCT GAAAAGGACG GAACATTTGC AAATACTGAA AGAAGAGTTC AGAAAATAAG AAAAGCAGTA AATCCACCAG GGGAGGCCCT TGAAGACTGG ATTATAATTA AAAAACTTGC TGAAAAGATG GGATATGGCG AAATGTTTAA CTATACTTCG CATGAGGACA TATTTAATGA GATTAGAAAA GCTACGCCAC AGTATGCAGG AATTACCTAC GGAAGATTAG GCACAGATGG CATTCACTGG CCATGTAAAA CAGAAGATAG TAAAGGAACT CCAATACTAC ATACTGAAAA ATTCCTTACG CCAGATGGAA TAGGTAAATT ATTTGCCATC GAATATGGGG AAGCCGCAGA GCTTCCAGAT GAAGAATATC CGATGATTTT GACCACTGGA AGGATTGTAT TCCACTACCA TACAGGAACA ATGACGAGAA AATGTAAGCA CATTACCTCA GAGATAAACG AGGGATTCGT AGAAATACAC CCCGAAGATG CTGAAAAATT AAACATTAAA AATAATGAAC TTGTCAAGGT TTCATCTAGG AGGGGCGAAG TAAAAGTTAA GGTAAGAGTC ACTAAAAATA TCAAAAAGGG AGTGGTATTT ATGCCGTTCC ACTTTGCAGA AAGTGCCGCA AACCTATTAA CTAACACCGC AGTAGATCCA AACTGTAAGA TACCAGAATT TAAAGTATGT GCAGTTAAAA TTGATAAACA ATAA
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Protein sequence | MTEFKMVHTV CPYCGCGCGI DLTVKDDKIV GTHPFKRHPV NEGKTCIKGN YCHEFVHSDE RLKKPLIKKD GQFVESSWEE VLDLIASKLK KYTPDEVGFF SSARCTNEDN YIFQKFSRAV MKTNNIDHCA RIUHSATVAG LGEAFGSGAM TNSIEDIEEA NCIFIIGSNT FEQHPIIARR IIRAKENGTK VIVVDPRKTM TAQQADIFLQ ITPGTNAAIL NGLINVIIKN NLIDNEFIKN RTKGFAELKK SVEKYTPEYV SKICGVSPEL IVEAAKIYAT SEKSSILYCM GVTQFIHGVD NVKCCCNLSS ITGNIGKRGT GVNPLRGQNN VQGACDMGAL PNVYPGYQKV NVPEIYGKFE ELWNTELSHD VGLTISEMIE KCGDELKCLY IMGENPMVSD PDINHLEHAF ESLDFLIVQD IFLTETAQMA DVVLPSACWA EKDGTFANTE RRVQKIRKAV NPPGEALEDW IIIKKLAEKM GYGEMFNYTS HEDIFNEIRK ATPQYAGITY GRLGTDGIHW PCKTEDSKGT PILHTEKFLT PDGIGKLFAI EYGEAAELPD EEYPMILTTG RIVFHYHTGT MTRKCKHITS EINEGFVEIH PEDAEKLNIK NNELVKVSSR RGEVKVKVRV TKNIKKGVVF MPFHFAESAA NLLTNTAVDP NCKIPEFKVC AVKIDKQ
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