Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0428 |
Symbol | |
ID | 5327204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 446206 |
End bp | 447237 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640787819 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001324626 |
Protein GI | 150400860 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0374599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT CTCAATTGGA AAATTTAAAA TCCTTTTATG ACAATAAGGT TATTCTAGTA ACGGGAGGAA CTGGCTCAAT AGGAAAAGAA ATTGTAAAAA CTTTATTAAA TTTTAATCCA AAGGCGATTA GAGTTTTAGA TATAAATGAA ACAGCACTTT TCGATTTAGA ACAAGAACTA AACACTCCTA AAATAAGGGC ATTTTTAGGT GATATAAGAG ATAAGGATAG ATTAAAAAGA GCTGTTGAAG GGGTAGATAT AATATTCCAT GCAGCAGCAT TAAAACATGT TCCCCTATGT GAATATAATC CATTCGAAGC AGTAAAAACA AATGTAATAG GTACTCAAAA TTTAATAGAT GTTGCGATGG ATGAAGAGGT TGAAAAATTC ATAACAGTAA GCACGGATAA GGCAGTCAAT CCAGTAAATG TTATGGGTGC AACTAAATTA TTAGCCGAAA GATTAACCAC TTCTGCGAAC TTATATAAAG GACATAGAAA AACTGCTTTT TCTGTTGTTA GATTTGGAAA TGTTTTAAAT TCGAGAGGTT CAATTTTACC ATTGTTAAAA GAACAATTAA AAAATGGAAA GGATATTACC TTAACACATC CTGAGATGAC GAGATTTATA ATGAGTATCA ACGATGCTGT AAAATTAGTT TTAAAATCAT GCACATTGGC AAAAGGTGGA GAAATATTCA TATTAAAAAT GCCTTCTGTA AAAATTAAAG ATTTAATAGA AGTGGTTGTT GAAGAGCTCG CTCCAAAATA TGGATATGAT CCAGAAGAGA TAAATATTAA AATAATTGGT AAAAGACCGG GCGAAAAATT ATATGAAGAG TTGATAGTAG AAGAAGAAAT TTATAAATTG GAAGAGTTAG AGGATATGTT TGTTGTTTAT CCTTATAAGT CAAATACAGA TAATAAAGAT AAAAAAATAA TTTATGATTC AAAAAATACT AAATTTTTAA GTAAGGGGGA AATTAAGAGA GTATTGTTTG ATATTAGATA CCTGGGTGAT AATTATGAAT GA
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Protein sequence | MNKSQLENLK SFYDNKVILV TGGTGSIGKE IVKTLLNFNP KAIRVLDINE TALFDLEQEL NTPKIRAFLG DIRDKDRLKR AVEGVDIIFH AAALKHVPLC EYNPFEAVKT NVIGTQNLID VAMDEEVEKF ITVSTDKAVN PVNVMGATKL LAERLTTSAN LYKGHRKTAF SVVRFGNVLN SRGSILPLLK EQLKNGKDIT LTHPEMTRFI MSINDAVKLV LKSCTLAKGG EIFILKMPSV KIKDLIEVVV EELAPKYGYD PEEINIKIIG KRPGEKLYEE LIVEEEIYKL EELEDMFVVY PYKSNTDNKD KKIIYDSKNT KFLSKGEIKR VLFDIRYLGD NYE
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