Gene Maeo_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0289 
Symbol 
ID5326734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp312764 
End bp314041 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content38% 
IMG OID640787683 
Product3-isopropylmalate dehydratase large subunit 
Protein accessionYP_001324490 
Protein GI150400724 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGA CATTAGCAGA AAAAATACTT GCAAAAGCAT CAGGAAATAA AACAGTAGCT 
CCCGGAGACA TAGTAATGGC CAAAATAGAA ACGGCAATGG CTCATGATAT TACTGGACCA
TTGACAGTGA ATACATTAAA AAATGAAGGA ATAGAAAAAG TATGGGATAA TGAAGAGAAA
ATAACAATAC TTTTCGACCA CCAAATACCT GCGGATAGTA TAACCGCAGC AGAAAACCAT
GCCCTTTTAA GAAAATTTGT AAAAGAACAA GGCATAAAAA ACTTCTATGA TATTAGAGAA
GGAGTTTGCC ATCAAGTTTT ACCTGAAAAA GGACATGTTT TACCAGGAAC CGTTGCAGTT
GGAGCAGATT CCCACACTTG CACATATGGA GCATTTGGAA CATTTGCAAC AGGAATAGGA
AGCACAGACA TGGCAGCAGT ATTTGCAACA GGAGAATTAT GGTTTAAAGT ACCTGAAACG
CTATACTTTA ATGTAAGTGG AAAATTAAAC GATTTCGTTA CCTCAAAAGA TGTAATATTA
AAAATAATTG GAGAAGTTGG ATTTGATGGC GCAACTTACA AAGCAGCCCA GTATGGCGGT
GAAACAGTTG AAGAGATGTC CATTTCTTCA AGAATGACCA TGTCAAATAT GGCCATTGAA
ATGGGTGCAA AAGCTGGACT TATAGAACCA GATGTAAAAA CAACATATTT CATAAAAAGG
GCTATGCAAA AGCACGGGAC AACAAGACCA TACACCGCAC TAAAAGGAGA CGAAGACGCT
AAATTTGAAG AAACCTATGA AATAGAAGTA AATGACTTAG AACCATTATT CGCTTGCCCT
CATGCTGTGG ATAATGTAAA AACTGCAAGA GAAGTTGCTG GAAGACCTAT TGACCAAGTA
TTTATCGGAA GTTGCACCAA CGGAAGAGTT GAGGATTTAA GAGCTGCAAT AAACATCATA
GACCAGCATG GAGGTATAGC TGATGATGTT AGGGTTGTAG TCACCCCAGC TTCAAGAGAG
GTAATGTTGG AGGCAATTAA CGAAGGAATT ATTCAAAAAT TCTATGAATA TGGCTGTGTC
GTAACAAATC CGTCATGTTC TGCATGTATG GGGGCCCTCT ATGGTATATT GGGACCTAAT
GAAGTTGGGG TTGCTACCTC AAATAGAAAT TTCAGAGGAA GAGAAGGTTC ATTGGAATCA
GAAGTTTATT TGGCCTCACC AATCACAGCA GCAGCTTGTG CGGTTAAAGG GGAATTAATA
GACCCAAGAG ATTTATAA
 
Protein sequence
MAMTLAEKIL AKASGNKTVA PGDIVMAKIE TAMAHDITGP LTVNTLKNEG IEKVWDNEEK 
ITILFDHQIP ADSITAAENH ALLRKFVKEQ GIKNFYDIRE GVCHQVLPEK GHVLPGTVAV
GADSHTCTYG AFGTFATGIG STDMAAVFAT GELWFKVPET LYFNVSGKLN DFVTSKDVIL
KIIGEVGFDG ATYKAAQYGG ETVEEMSISS RMTMSNMAIE MGAKAGLIEP DVKTTYFIKR
AMQKHGTTRP YTALKGDEDA KFEETYEIEV NDLEPLFACP HAVDNVKTAR EVAGRPIDQV
FIGSCTNGRV EDLRAAINII DQHGGIADDV RVVVTPASRE VMLEAINEGI IQKFYEYGCV
VTNPSCSACM GALYGILGPN EVGVATSNRN FRGREGSLES EVYLASPITA AACAVKGELI
DPRDL